DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4b1 and Cyp4p2

DIOPT Version :9

Sequence 1:NP_031849.1 Gene:Cyp4b1 / 13120 MGIID:103225 Length:511 Species:Mus musculus
Sequence 2:NP_610472.1 Gene:Cyp4p2 / 35946 FlyBaseID:FBgn0033395 Length:520 Species:Drosophila melanogaster


Alignment Length:536 Identity:158/536 - (29%)
Similarity:254/536 - (47%) Gaps:75/536 - (13%)


- Green bases have known domain annotations that are detailed below.


Mouse    15 LWASVVILMVT--VLK------LLSLLFRR--QKLARALDSFP----------------GPPKHW 53
            ||.||.||:|.  :.|      :|:...||  .|..:.|||..                |.....
  Fly     6 LWISVAILVVIHWIYKVNKDYNILAFFARRVQTKDGKPLDSLVPMIKGRTVFANCFDLLGKDTDQ 70

Mouse    54 LFGHALEIQKTGGLDKVVTWTEQFPYAHPLWLGQFIVFLNIYEPDYAKAVYSRGDPK---AAYVY 115
            :|.|..::.|..| |..:.::          :|    |.|....|...|......|.   ...:|
  Fly    71 VFTHLRQLAKNSG-DSYLQYS----------MG----FSNFNVIDAHNAANILNHPNLITKGVIY 120

Mouse   116 DFFLQWIGKGLLVLEGPKWFQHRKLLTPGFHYDVLKPYVAIF-AESTRVMLDKWEKKASENKSFD 179
            :|...::..|:|.....||...|.:||..||.|:|..:..|| |||.:.:    .:...:|:...
  Fly   121 NFLHPFLRTGVLTATEKKWHTRRSMLTRTFHLDILNQFQEIFIAESLKFV----SQFQGQNEVVV 181

Mouse   180 IFCD-VGHMALDTLMKCTFG-KGDSGLSHSDN---SYYLAVSDLTLLMQQRIDSFQYHNDFIYWL 239
            ...| :....|:::.:...| |.|......|.   ::::....||    :||.:..|.:|.:|.:
  Fly   182 SLKDRISRFTLNSICETAMGIKLDEMAEKGDRYRANFHIIDEGLT----RRIVNPLYWDDCVYNM 242

Mouse   240 TPHGRRFLRACQIAHDHTDHVIRQRKAALQDEKEQKKLQE----------RRHLDFLDILLGARD 294
            .. |.::..|.::.|:.:..:|.:|:..|::|.|.::..:          ::....||.|:.| :
  Fly   243 FT-GHKYNAALKVVHEFSREIIAKRRVLLEEELENRRATQTADDDICVIRKKRFAMLDTLICA-E 305

Mouse   295 ESGIKLSDADLRAEVDTFMFEGHDTTTSGISWFLYCMALYPMHQQRCREEVRE-ILGDRDSFQWD 358
            :.|: :.|..:..||||.|.||:|||:.|:.:.|..|:||...|:.|.:|::| ||.|..:....
  Fly   306 KDGL-IDDIGISEEVDTLMAEGYDTTSIGLVFGLMNMSLYAAEQELCYQEIQEHILDDLSNLNLS 369

Mouse   359 DLAQMTYLTMCMKECFRLYPPVPQVYRQLSKPVTFVDGRSLPAGSLISLHIYALHRNSAVWPDPE 423
            .|:::.||...:||..||||.:|.:.||..:.....:|..||..|.|::|::.:|||...|..||
  Fly   370 QLSKLNYLGYFIKETMRLYPSIPIMGRQTLQETELENGLILPKRSQINIHVFDIHRNPKYWESPE 434

Mouse   424 VFDPLRFSPENMTGRHPFAFMPFSAGPRNCIGQQFAMNEMKVVTALCLLRFEFSP--DPSKIPIK 486
            .|.|.||.|:|...|||:|::|||||.||||||::||.|||.:..:.|..|:..|  ||..|..:
  Fly   435 EFRPERFLPQNCLKRHPYAYIPFSAGQRNCIGQKYAMQEMKTLMVVILKHFKILPVIDPKSIVFQ 499

Mouse   487 VPQLILRSKNGIHLYL 502
            | .:.||.||.|.:.|
  Fly   500 V-GITLRFKNKIKVKL 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4b1NP_031849.1 p450 47..500 CDD:278495 142/490 (29%)
Cyp4p2NP_610472.1 p450 63..514 CDD:299894 142/477 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167845353
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.850

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