DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4b1 and Cyp4ac1

DIOPT Version :9

Sequence 1:NP_031849.1 Gene:Cyp4b1 / 13120 MGIID:103225 Length:511 Species:Mus musculus
Sequence 2:NP_608916.1 Gene:Cyp4ac1 / 33754 FlyBaseID:FBgn0031693 Length:509 Species:Drosophila melanogaster


Alignment Length:520 Identity:156/520 - (30%)
Similarity:259/520 - (49%) Gaps:48/520 - (9%)


- Green bases have known domain annotations that are detailed below.


Mouse    15 LWASV----VILMVTVLKL---------LSLLFR-RQKLARALDS----FPGPPKHWLFGHALEI 61
            :|.::    ::|.|..|.|         |||..| |.:....|:|    .||..:   ||:.|:|
  Fly     1 MWIALLGIPILLAVLTLLLKHINKTYFILSLTKRVRTEDGSPLESKVAIMPGKTR---FGNNLDI 62

Mouse    62 ---QKTGGLDKVVTWTEQFPYAHPLWLGQFIVFLNIYEPDYAKAVYSRGDPKAA---YVYDFFLQ 120
               ......:.|...|.:....:.||...:....|:..|:.|:.|:.  ..|..   .||:....
  Fly    63 LNFTPASVFNFVRESTAKAKGQNYLWYFLYAPMYNVVRPEEAEEVFQ--STKLITKNVVYELIRP 125

Mouse   121 WIGKGLLVLEGPKWFQHRKLLTPGFHYDVLKPYVAIFAESTRVMLDKWEKKASENKSFDIFCDVG 185
            ::|.|||:....||...||.|||.||::||:.::.||.|..:..|:..||..  :...::...:.
  Fly   126 FLGDGLLISTDHKWHSRRKALTPAFHFNVLQSFLGIFKEECKKFLNVLEKNL--DAELELNQVIP 188

Mouse   186 HMALDTLMKCTFGKGDSGLSHSDNSYYLAVSDLTLLMQQRI-DSFQYHNDFIYWLTPHGRRFLRA 249
            ...|:.:.:...|.....:|.. |.|..|:..:..::.||: :...|:| :.:::....|:.|:.
  Fly   189 PFTLNNICETALGVKLDDMSEG-NEYRKAIHAIEEVLIQRVCNPLMYYN-WYFFVYGDYRKHLQN 251

Mouse   250 CQIAHDHTDHVIRQRKAALQDEKEQKKLQE------RRHLDFLDILLGARDESGIKLSDADLRAE 308
            .:|.||.:..:|.:::...|    ||:|.|      ::....||.||.|  |:..::....:..|
  Fly   252 LRIVHDFSSRIIERKRQQFQ----QKQLGEVDEFGRKQRYAMLDTLLAA--EADGQIDHQGICDE 310

Mouse   309 VDTFMFEGHDTTTSGISWFLYCMALYPMHQQRCREEVREILGDRDSFQWDDLAQMTYLTMCMKEC 373
            |:||||||:|||::.:.:.|..:||:...|::|.|||..:..|.|........::.||...:||.
  Fly   311 VNTFMFEGYDTTSTCLIFTLLMLALHEDVQKKCYEEVENLPEDSDDISMFQFNKLVYLECVIKES 375

Mouse   374 FRLYPPVPQVYRQLSKPVTFVDGRSLPAGSLISLHIYALHRNSAVWPDPEVFDPLRFSPENMTGR 438
            .|::|.||.:.||..:. |.|:|..:|..:.||:|||.:.|:...:|.|::|.|.||.|||...|
  Fly   376 LRMFPSVPFIGRQCVEE-TVVNGMVMPKDTQISIHIYDIMRDPRHFPKPDLFQPDRFLPENTVNR 439

Mouse   439 HPFAFMPFSAGPRNCIGQQFAMNEMKVVTALCLLRFEFSPDPSKIPIKVPQ-LILRSKNGIHLYL 502
            ||||::|||||.||||||:||:.||||:.|..:..|:..|......:.... ::||::..|.:.|
  Fly   440 HPFAYVPFSAGQRNCIGQKFAILEMKVLLAAVIRNFKLLPATQLEDLTFENGIVLRTQENIKVKL 504

Mouse   503  502
              Fly   505  504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4b1NP_031849.1 p450 47..500 CDD:278495 143/466 (31%)
Cyp4ac1NP_608916.1 p450 86..504 CDD:278495 135/430 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167845354
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.850

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