DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4b1 and Cyp4s3

DIOPT Version :9

Sequence 1:NP_031849.1 Gene:Cyp4b1 / 13120 MGIID:103225 Length:511 Species:Mus musculus
Sequence 2:NP_573003.2 Gene:Cyp4s3 / 32444 FlyBaseID:FBgn0030615 Length:495 Species:Drosophila melanogaster


Alignment Length:510 Identity:180/510 - (35%)
Similarity:265/510 - (51%) Gaps:53/510 - (10%)


- Green bases have known domain annotations that are detailed below.


Mouse    15 LWASVVILMVTVLKLLSLLFRRQKLARALDSFPGPPKHWLFGHALEIQKTGGLDKVVTWTEQFPY 79
            |||:.:..:..:|..|    |.|:.|:.|   |||    ..|..:...|.|   :::.|.::...
  Fly    11 LWAAFLRYLPKILNFL----RLQRFAKTL---PGP----TIGELIANVKKG---EILNWLKELRE 61

Mouse    80 AH----PLWLGQFIVFLNIYEPDYAKAVY--------SRGDPKAAYVYDFFLQWIGKGLLVLEGP 132
            .|    .:|.|:.::.: ..:|:..|.:.        ||.       |:....|:|||||...|.
  Fly    62 KHGPVFRIWFGKDLMVM-FTDPEDIKQLLGNNQLLTKSRN-------YELLEPWLGKGLLTNGGE 118

Mouse   133 KWFQHRKLLTPGFHYDVLKPYVAIFAESTRVMLDKWEKKASENKSFDIFCDVGHMALDTLMKCTF 197
            .|.:.|||||||||:.:|..:.....|:.|:::.:...||: .:||||:..:...|||.:.:...
  Fly   119 SWHRRRKLLTPGFHFRILSEFKEPMEENCRILVRRLRTKAN-GESFDIYPYITLFALDAICETAM 182

Mouse   198 GKGDSGLSHSDNSYYLAVSDLTLLMQQRIDSFQYHNDFIYWLTPHGRRFLRACQIAHDHTDHVIR 262
            |........||:.|..||..:..:|.::..||....:..:..|..|:....|.::.||.|:.|||
  Fly   183 GIKKHAQLQSDSEYVQAVQSICRVMHKQSFSFWQRLNVFFKHTKPGKEREAALKVLHDETNRVIR 247

Mouse   263 QRKAAL-------QDEKEQKKLQERRHLDFLDILLGARDESGIKLSDADLRAEVDTFMFEGHDTT 320
            .|:..|       :.|.||..:..:|.|.|||:||..:.|.|.:|||.|:|.|||||||||||||
  Fly   248 LRREQLIQERNEWKPEAEQDDVGAKRRLAFLDMLLLTQMEGGAELSDTDIREEVDTFMFEGHDTT 312

Mouse   321 TSGISWFLYCMALYPMHQQRCREEVREILG-DRDSFQWDDLAQMTYLTMCMKECFRLYPPVPQVY 384
            :|.|::.|..::..|..|||..||..|:.| :::|        |.||...:||..|:||.||...
  Fly   313 SSAIAFALSLLSKNPDVQQRAFEEASELEGREKES--------MPYLEAVIKETLRIYPSVPFFS 369

Mouse   385 RQLSKPVTFVDGRSLPAGSLISLHIYALHRNSAVWPDPEVFDPLRFSPENMTGRHPFAFMPFSAG 449
            |::.:.:. |...::|.|:.||..||.|||:...:||||.|||.||. .|....|||||..||||
  Fly   370 RKVLEDLE-VGKLTVPKGASISCLIYMLHRDPKNFPDPERFDPDRFL-VNEKQMHPFAFAAFSAG 432

Mouse   450 PRNCIGQQFAMNEMKVVTALCLLRFEFSPDPSKIPIKVPQLILRSKNGIHLYLKP 504
            |||||||:|||.|:|...|:.|..:.|.||....|..:.:|:.:|.|||.|.:.|
  Fly   433 PRNCIGQKFAMLELKTSLAMLLRSYRFLPDKDHQPKPLAELVTKSGNGIRLRILP 487

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4b1NP_031849.1 p450 47..500 CDD:278495 169/472 (36%)
Cyp4s3NP_573003.2 p450 35..469 CDD:278495 165/462 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167845014
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.650

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