DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4a12b and Cyp6a17

DIOPT Version :9

Sequence 1:NP_758510.2 Gene:Cyp4a12b / 13118 MGIID:3611747 Length:508 Species:Mus musculus
Sequence 2:NP_001286433.1 Gene:Cyp6a17 / 45556 FlyBaseID:FBgn0015714 Length:501 Species:Drosophila melanogaster


Alignment Length:563 Identity:133/563 - (23%)
Similarity:232/563 - (41%) Gaps:146/563 - (25%)


- Green bases have known domain annotations that are detailed below.


Mouse    21 VASVLSLLLLLFKTAQLYLHRQWLLSSTQQFPSPPSHWLFGHKILKD--------QDLQDILTRI 77
            :..:||||:...:....|..|:.:       |....|.|||:  :||        :..:|...:.
  Fly     7 IVVILSLLVFAARRRHGYWQRRGI-------PHDEVHPLFGN--IKDWPNKRHIAEIFRDYYFKY 62

Mouse    78 KN--FPSACPQWLWGSKVRIQVYDPDYMKLILGR---------------SDPKAHGSYRFLAPWI 125
            ||  :|.| ..:.:.::..: |.|.:.:|.:|.:               .||            :
  Fly    63 KNSDYPFA-GFFFFFTRTAV-VTDMELLKRVLIKDFNHFENRGVFYNEIDDP------------L 113

Mouse   126 GRGLLLLDGQTWFQHRRMLTPAFHYDILKPYTEIMADSVHVMLDK---WEQIVGQDSTLEIFQHI 187
            ...|..::||.|...|..|||.|....:|....|:. .|...:||   .:....:...||:...:
  Fly   114 SATLFSIEGQKWRHLRHKLTPTFTSGKMKNMFPIVV-KVGEEMDKVFRSKTAADRGQVLEVVDLV 177

Mouse   188 TLMTLDTIMKCAF-----------------------SHE----------GSVQLDR--KYKSYIQ 217
            ...|.|.|..|||                       .|.          |..:|.|  :.|..||
  Fly   178 ARYTADVIGNCAFGLNCNSLYDPKAEFVSIGKRAITEHRYGNMLDIFLFGFPKLSRRLRLKLNIQ 242

Mouse   218 AVEDLNNLFFLRVRNIFHQNDIIYRVSSNGCLANSACQLAHDHTDQVIKSRRSQLQDEEELEKLK 282
            ..||    |:.::    .:..|.||:.:                                     
  Fly   243 EAED----FYTKI----VRETIDYRLRT------------------------------------- 262

Mouse   283 KKRRLDFLDIL--LFARMENGKS---LSDKDLRAEVDTFMFEGHDTTASGISWIFYALATNPEHQ 342
            |::|.||:|.|  ::...::|.|   |:..:|.|:...|...|.:|:::.:.:..|.||.|.:.|
  Fly   263 KEKRNDFMDSLIEMYKNEQSGNSEDGLTFNELLAQAFIFFVAGFETSSTTMGFALYELARNQDVQ 327

Mouse   343 QRCRKEIQSLLG-DGASITWNDLDKMPYTTMCIKEALRIYPPVPSVSRELSSPVTFPDGR-SLPK 405
            .:.|:||.::.| .....|:..:.:|.|....:.|.||.||.:..::|...:..:..|.: .:.|
  Fly   328 DKLREEIGNVFGKHNKEFTYEGIKEMKYLEQVVMETLRKYPVLAHLTRMTDTDFSPEDPKYFIAK 392

Mouse   406 GIHVMLSFYGLHHNPTVWPNPEVFDPSRFAPG--SSRHSHSFLPFSGGARNCIGKQFAMNELKVA 468
            |..|::...|:|::|.::|.||:|.|.||...  ::|.|.::|||..|.|||||.:|.|.:..|.
  Fly   393 GTIVVIPALGIHYDPDIYPEPEIFKPERFTDEEIAARPSCTWLPFGEGPRNCIGLRFGMMQTCVG 457

Mouse   469 VALTL--LRFELLPDPTRVP--IPIPRIVLKSKNGIHLHLKKL 507
            :|..:  .:|.:.|: |::|  |.:..|::.::|||||.::||
  Fly   458 LAYLIRGYKFSVSPE-TQIPMKIVVKNILISAENGIHLKVEKL 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4a12bNP_758510.2 CYP4B-like 70..503 CDD:410771 117/500 (23%)
Cyp6a17NP_001286433.1 p450 36..478 CDD:278495 117/504 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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