DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4a12b and Cyp4p1

DIOPT Version :9

Sequence 1:NP_758510.2 Gene:Cyp4a12b / 13118 MGIID:3611747 Length:508 Species:Mus musculus
Sequence 2:NP_524828.1 Gene:Cyp4p1 / 45524 FlyBaseID:FBgn0015037 Length:513 Species:Drosophila melanogaster


Alignment Length:530 Identity:152/530 - (28%)
Similarity:254/530 - (47%) Gaps:70/530 - (13%)


- Green bases have known domain annotations that are detailed below.


Mouse    24 VLSLLLLLFKTAQLYLHRQWLLSSTQQF----------------------PSPPSHWLFGHKI-L 65
            ::.|.|:|..:|.||    ||..:.:.:                      |......:||:.: |
  Fly     1 MIILWLILALSALLY----WLHRANKDYHILSFFTKRIRLKDGTPVEIIAPIAKGKTIFGNTLDL 61

Mouse    66 KDQDLQDILT----RIKNFPSACPQWLWGSKVRIQVYDPDYMKLILGRSDPKAHG-SYRFLAPWI 125
            ..:|...:..    |.|...::..::::| |....:.|.|..:.:|...:....| .|.||.|::
  Fly    62 YGRDHAGVFNYSRERAKEMGTSYIEYVFG-KAIYNIIDADSAENVLNHPNLITKGLVYNFLHPFL 125

Mouse   126 GRGLLLLDGQTWFQHRRMLTPAFHYDILKPYTEIMADSVHVMLDKWEQIVGQDS-TLEIFQHITL 189
            ..|||...|:.|...|:||||.||::||..:.||........|.::|   |||. |:.:...|..
  Fly   126 RTGLLTSTGKKWHARRKMLTPTFHFNILNQFQEIFKTESQKFLLQFE---GQDEVTITLHDVIPR 187

Mouse   190 MTLDTIMKCAFSHEGSVQLDR------KYKSYIQAVEDLNNLFFLRVRNIFHQNDIIYRVSSNGC 248
            .||::|.:.|.    .|:||.      :|:.....:|:   .|..|:.|.....|.::.:.:...
  Fly   188 FTLNSICETAM----GVKLDEMAEKGDRYRENFSQIEE---CFIRRLSNPLLWGDKLFEMFAAKD 245

Mouse   249 LANSACQLAHDHTDQVIKSRRSQLQDEEELEK---------LKKKRRLDFLDILLFARMENGKSL 304
            .| ||..:.|..:.::|..||..|:|  ||:|         ...|:|...||.|::|  |....:
  Fly   246 FA-SALDVVHRFSSEIIAKRRDLLKD--ELDKSSSTADDDGFVSKKRFAMLDTLIYA--EKDGLI 305

Mouse   305 SDKDLRAEVDTFMFEGHDTTASGISWIFYALATNPEHQQRCRKEIQSLLGDGAS-ITWNDLDKMP 368
            ....:..||||.||||:|||:.|:.:....::.||:.|:.|.:|||..:.|..| :....|:|:.
  Fly   306 DHIGICEEVDTLMFEGYDTTSIGLIFGLMNMSLNPDKQELCYQEIQEHIDDDLSNLDVGQLNKLK 370

Mouse   369 YTTMCIKEALRIYPPVPSVSRELSSPVTFPDGRSLPKGIHVMLSFYGLHHNPTVWPNPEVFDPSR 433
            |....:||..|::|.||.:.||........:|..||||..:.:..:.:|.|...|.:||.|.|.|
  Fly   371 YLEYFMKETTRLFPSVPIMGREAVQETELANGLILPKGAQITIHVFDIHRNAKYWDSPEEFRPER 435

Mouse   434 FAPGS--SRHSHSFLPFSGGARNCIGKQFAMNELKVAVALTLLRFELLP--DPTRVPIPIPRIVL 494
            |.|.:  .||:::::|||.|.||||||::||.|:|..:.:.|.:|::|.  ||.:: :....|.|
  Fly   436 FLPENVQDRHTYAYVPFSAGQRNCIGKKYAMQEMKTLMVVLLKQFKVLKAIDPQKI-VFHTGITL 499

Mouse   495 KSKNGIHLHL 504
            ::::.|.:.|
  Fly   500 RTQDKIRVKL 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4a12bNP_758510.2 CYP4B-like 70..503 CDD:410771 138/458 (30%)
Cyp4p1NP_524828.1 p450 54..509 CDD:278495 142/471 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167845070
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.850

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