DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4a12b and Cyp4p3

DIOPT Version :9

Sequence 1:NP_758510.2 Gene:Cyp4a12b / 13118 MGIID:3611747 Length:508 Species:Mus musculus
Sequence 2:NP_610473.1 Gene:Cyp4p3 / 35948 FlyBaseID:FBgn0033397 Length:515 Species:Drosophila melanogaster


Alignment Length:459 Identity:144/459 - (31%)
Similarity:237/459 - (51%) Gaps:57/459 - (12%)


- Green bases have known domain annotations that are detailed below.


Mouse    78 KNFPSACPQWLWGSKVRIQVYDPDYMKLILGRSDPKAHGS---YRFLAPWIGRGLLLLDGQTWFQ 139
            |....:..::..|:.: ..|.|.|..:.:|  :||.....   |.||.|::..|||...|:.|..
  Fly    78 KKLGKSYAEYAMGTAI-YNVIDADSAERVL--NDPNLINKGTIYDFLHPFLRTGLLTSTGKKWHA 139

Mouse   140 HRRMLTPAFHYDILKPYTEI-MADSVHVMLDKWEQIVGQD-STLEIFQHITLMTLDTIMKCAFSH 202
            .|:||:|.||::||..:.|| :.:|:..:    ||..|.| :.:.:.:.|...||::|.:.|.  
  Fly   140 RRKMLSPTFHFNILNQFQEIFITESLKFL----EQFKGNDEAIISLNEVIPRFTLNSICETAM-- 198

Mouse   203 EGSVQLDR------KYKSYIQAVEDLNNLFFLRVRNIFHQNDIIYRVSSNGCLANSACQLAHDHT 261
              .|:||.      :|:...:.:|:   .|..|:.|....:|.::::.:....| ||..:.|..:
  Fly   199 --GVKLDEMAEKGDRYRENFRQIEE---CFIRRMSNPLLWSDTLFKMFAEKDYA-SALDVVHGFS 257

Mouse   262 DQVIKSRRSQLQDE---------EELEKLKKKRRLDFLDILLFARMENGKSLSDKD-------LR 310
            .::|..||.||.||         .|.|....|:|...||.|:         |::||       :.
  Fly   258 SEIIAKRRDQLNDEIDSRGNTQTAEDELFTSKKRFAMLDTLI---------LAEKDGLIDHIGIC 313

Mouse   311 AEVDTFMFEGHDTTASGISWIFYALATNPEHQQRCRKEIQSLLGDGASI-TWNDLDKMPYTTMCI 374
            .||||.||||:|||:.|:.:....::..||.|::|.:|||:.:.|..:| ....|:|:......|
  Fly   314 EEVDTLMFEGYDTTSIGLMFGLMNMSLYPEEQEKCYQEIQANIDDELNILNIGQLNKLKNLEYFI 378

Mouse   375 KEALRIYPPVPSVSRELSSPVTFPDGRSLPKGIHVMLSFYGLHHNPTVWPNPEVFDPSRFAPGSS 439
            ||.:|::|.||::.||.:......:|..||||..:.:..:.:|.||..|.:||.|.|.||.|.:|
  Fly   379 KETMRLFPSVPAMGRETTRETELSNGLILPKGSQIFVHVFDIHRNPEYWDSPEEFRPERFLPENS 443

Mouse   440 --RHSHSFLPFSGGARNCIGKQFAMNELKVAVALTLLRFELLP--DPTRVPIPIPRIVLKSKNGI 500
              ||:::::|||.|.|||||::|||.|:|..:...|.:|::||  ||..:... ..:.|::||.|
  Fly   444 QNRHTYAYIPFSAGQRNCIGQKFAMQEMKTLMVALLKQFQILPEIDPKTIVFQ-TGLTLRTKNQI 507

Mouse   501 HLHL 504
            |:.|
  Fly   508 HVKL 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4a12bNP_758510.2 CYP4B-like 70..503 CDD:410771 143/456 (31%)
Cyp4p3NP_610473.1 p450 54..505 CDD:278495 139/451 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167845069
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.850

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