DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4a12b and Cyp4d21

DIOPT Version :9

Sequence 1:NP_758510.2 Gene:Cyp4a12b / 13118 MGIID:3611747 Length:508 Species:Mus musculus
Sequence 2:NP_609129.2 Gene:Cyp4d21 / 34036 FlyBaseID:FBgn0031925 Length:511 Species:Drosophila melanogaster


Alignment Length:537 Identity:149/537 - (27%)
Similarity:256/537 - (47%) Gaps:90/537 - (16%)


- Green bases have known domain annotations that are detailed below.


Mouse    24 VLSLLLLLFKTAQLYLHRQWLLSSTQQ------FPSPPSHWLFGHKILKDQDLQDILTRIKNFPS 82
            :|.:.:|:.........:||.:::.::      |..|          :....||.:..|.:||..
  Fly     4 LLGIAVLIMTLVWDNSRKQWRVNTFEKSRILGPFTIP----------IVGNGLQALTLRPENFIQ 58

Mouse    83 ACPQWL--WGSKVRI------QVYDPD--YMKLILGRSD--PKAHGSYRFLAPWIGRGLLLLDGQ 135
            ....:.  :|...|:      .:|..|  |.:.||..|.  .||| .||||..::|.||||..|.
  Fly    59 RFGDYFNKYGKTFRLWILGECLIYTKDLKYFESILSSSTLLKKAH-LYRFLRDFLGDGLLLSTGN 122

Mouse   136 TWFQHRRMLTPAFHYDILKPYTEIMADSVHVMLDKWEQIVGQDSTLEIFQHITLMTLDTIMKCAF 200
            .|...|::|.||||:..|:.:.|||..:..:|::|.:......:.:::|:.::|..||...:.|.
  Fly   123 KWTSRRKVLAPAFHFKCLENFVEIMDRNSGIMVEKLKNYADGKTCVDLFKFVSLEALDVTTETAM 187

Mouse   201 SHEGSVQLDRKYKSYIQAVEDL---------------NNLFFLRVRNIFH--QNDIIYRVSSNGC 248
            ..:.:.|.:..: .|.:|::.:               |.||.|....::.  |.||         
  Fly   188 GVQVNAQNEPNF-PYTKALKSVVYIESKRLASVSMRYNWLFPLAAPLVYRRLQKDI--------- 242

Mouse   249 LANSACQLAHDHTDQVIKSRRSQLQ--------------DEEELEKLKKKRRLDFLDILLFARME 299
                  .:..|.||:||:.||:.|:              |::    :..|.::..|||||.|.::
  Fly   243 ------AIMQDFTDKVIRERRAILERARADGTYKPLIMGDDD----IGGKAKMTLLDILLQATID 297

Mouse   300 NGKSLSDKDLRAEVDTFMFEGHDTTASGISWIFYALATNPEHQQRCRKEIQSLLG--DGASITWN 362
            | |.|||.|:|.|||.|:|.|.|||.||:|...:|::.:|:.|:...:|:.|:||  ..||:|..
  Fly   298 N-KPLSDVDIREEVDVFIFAGDDTTTSGVSHALHAISRHPKVQECIYEELVSVLGPDPDASVTQT 361

Mouse   363 DLDKMPYTTMCIKEALRIYPPVPSVSRELSSPVTFPDGR-SLPKGIHVMLSFYGLHHNPTVWPNP 426
            .|.::.|....|||.:|::||||.:.|.:  |.....|. ::|....::|..|.::.:|..:|:|
  Fly   362 KLLELKYLDCVIKETMRLHPPVPILGRYI--PEDLKIGEITIPGNTSILLMPYYVYRDPEYFPDP 424

Mouse   427 EVFDPSRF---APGSSRHSHSFLPFSGGARNCIGKQFAMNELKVAVALTLLRFELLPDPTRVPIP 488
            .||.|.|:   ...|:....:::|||.|.:||||::||..::|..::..:..:||||....:...
  Fly   425 LVFKPERWMDMKTTSNTPPLAYIPFSSGPKNCIGQKFANLQMKALISKVIRHYELLPLGADLKAT 489

Mouse   489 IPRIVLKSKNGIHLHLK 505
            . ..:|.|..|.::.||
  Fly   490 Y-TFILSSSTGNNVGLK 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4a12bNP_758510.2 CYP4B-like 70..503 CDD:410771 141/481 (29%)
Cyp4d21NP_609129.2 p450 35..482 CDD:278495 139/480 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167845024
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D214327at33208
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.750

Return to query results.
Submit another query.