DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4a12b and Cyp4ac1

DIOPT Version :9

Sequence 1:NP_758510.2 Gene:Cyp4a12b / 13118 MGIID:3611747 Length:508 Species:Mus musculus
Sequence 2:NP_608916.1 Gene:Cyp4ac1 / 33754 FlyBaseID:FBgn0031693 Length:509 Species:Drosophila melanogaster


Alignment Length:547 Identity:155/547 - (28%)
Similarity:261/547 - (47%) Gaps:105/547 - (19%)


- Green bases have known domain annotations that are detailed below.


Mouse    19 LQVASVLSLLLLLFKTAQLYLHRQW-LLSSTQQF----PSP--------PSHWLFGHKILKDQDL 70
            |.:..:|::|.||.|    ::::.: :||.|::.    .||        |....||:.:      
  Fly     6 LGIPILLAVLTLLLK----HINKTYFILSLTKRVRTEDGSPLESKVAIMPGKTRFGNNL------ 60

Mouse    71 QDILTRIKNFPSAC--------------PQWLWGSKVRIQVYDPDY--------------MKLIL 107
             |||    ||..|.              ..:||     ..:|.|.|              .||| 
  Fly    61 -DIL----NFTPASVFNFVRESTAKAKGQNYLW-----YFLYAPMYNVVRPEEAEEVFQSTKLI- 114

Mouse   108 GRSDPKAHGSYRFLAPWIGRGLLLLDGQTWFQHRRMLTPAFHYDILKPYTEIMADSVHVMLDKWE 172
                 ..:..|..:.|::|.|||:.....|...|:.||||||:::|:.:..|..:.....|:..|
  Fly   115 -----TKNVVYELIRPFLGDGLLISTDHKWHSRRKALTPAFHFNVLQSFLGIFKEECKKFLNVLE 174

Mouse   173 QIVGQDSTLEIFQHITLMTLDTIMKCAFSHEGSVQLD-----RKYKSYIQAVEDLNNLFFLRVRN 232
            :  ..|:.||:.|.|...||:.|.:.|.    .|:||     .:|:..|.|:|:   :...||.|
  Fly   175 K--NLDAELELNQVIPPFTLNNICETAL----GVKLDDMSEGNEYRKAIHAIEE---VLIQRVCN 230

Mouse   233 --------IFHQNDIIYRVSSNGCLANSACQLAHDHTDQVIKSRRSQLQDEE--ELEKLKKKRRL 287
                    .|...|  ||..    |.|  .::.||.:.::|:.:|.|.|.::  |:::..:|:|.
  Fly   231 PLMYYNWYFFVYGD--YRKH----LQN--LRIVHDFSSRIIERKRQQFQQKQLGEVDEFGRKQRY 287

Mouse   288 DFLDILLFARMENGKSLSDKDLRAEVDTFMFEGHDTTASGISWIFYALATNPEHQQRCRKEIQSL 352
            ..||.||.|..:.  .:..:.:..||:||||||:|||::.:.:....||.:.:.|::|.:|:::|
  Fly   288 AMLDTLLAAEADG--QIDHQGICDEVNTFMFEGYDTTSTCLIFTLLMLALHEDVQKKCYEEVENL 350

Mouse   353 LGDGASITWNDLDKMPYTTMCIKEALRIYPPVPSVSRELSSPVTFPDGRSLPKGIHVMLSFYGLH 417
            ..|...|:....:|:.|....|||:||::|.||.:.|:.... |..:|..:||...:.:..|.:.
  Fly   351 PEDSDDISMFQFNKLVYLECVIKESLRMFPSVPFIGRQCVEE-TVVNGMVMPKDTQISIHIYDIM 414

Mouse   418 HNPTVWPNPEVFDPSRFAPGS--SRHSHSFLPFSGGARNCIGKQFAMNELKVAVALTLLRFELLP 480
            .:|..:|.|::|.|.||.|.:  :||..:::|||.|.|||||::||:.|:||.:|..:..|:|||
  Fly   415 RDPRHFPKPDLFQPDRFLPENTVNRHPFAYVPFSAGQRNCIGQKFAILEMKVLLAAVIRNFKLLP 479

Mouse   481 DPTRVPIPIPR-IVLKSKNGIHLHLKK 506
            ......:.... |||:::..|.:.|.|
  Fly   480 ATQLEDLTFENGIVLRTQENIKVKLSK 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4a12bNP_758510.2 CYP4B-like 70..503 CDD:410771 139/478 (29%)
Cyp4ac1NP_608916.1 p450 86..504 CDD:278495 133/448 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167845072
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1247045at2759
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.850

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