DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4a12b and Cyp311a1

DIOPT Version :9

Sequence 1:NP_758510.2 Gene:Cyp4a12b / 13118 MGIID:3611747 Length:508 Species:Mus musculus
Sequence 2:NP_572780.3 Gene:Cyp311a1 / 32170 FlyBaseID:FBgn0030367 Length:483 Species:Drosophila melanogaster


Alignment Length:509 Identity:150/509 - (29%)
Similarity:253/509 - (49%) Gaps:62/509 - (12%)


- Green bases have known domain annotations that are detailed below.


Mouse    28 LLLLFKTAQLYLHRQWLLSSTQQFPSPPSHWLFGHK----ILKDQDLQDILTRIKNFPSAC---- 84
            |||:..|..:.:.:..||......|.|.:..|.|:.    .|:.:.:..:.|.:::...|.    
  Fly     6 LLLITLTIWILVRKWTLLRLGSSLPGPWAFPLLGNAQMVGKLRPEYIFLVFTELRDRFGATYRLR 70

Mouse    85 --PQWLW-----GSKVRIQVYDPDYMKLILGRSDPKAHGSYRFLAPWIGRGLLLLDGQTWFQHRR 142
              || ||     ..:.|..::||     .|.::|     ::..|.|.||.|||:..|..|.:.||
  Fly    71 LGPQ-LWVFLHSAEETRQALHDP-----TLRKAD-----TFMQLEPLIGNGLLISHGAHWTRQRR 124

Mouse   143 MLTPAFHYDILKPYTEIMADSVHVMLDKWEQIVG-----QDSTLEIFQHITLMTLDTIMKCAFSH 202
            :|||||...:|:.:...:...|       |::||     :.:.||:.:.:....||.|:..:.  
  Fly   125 LLTPAFQPQLLRSFAPAIGGHV-------ERLVGRLGATRGAFLEVTEPLFACLLDAIVDTSM-- 180

Mouse   203 EGSVQLDRK---YKSYIQAVEDLNNLFFLRVRNIFHQNDIIYRVSSNGCLANSACQLAHDHTDQV 264
              ..|||.:   :...|||....:.|.|.|:.|....:|.|::.:......:...|:.|...:.|
  Fly   181 --GAQLDTQSVDHSPIIQAFHLSSKLLFKRMINPLLSSDWIFQRTQLWRDLDEQLQVIHSQMESV 243

Mouse   265 IKSRRSQLQDEEELEKLKKKRRLDFLDILLFARMENGKSLSDKDLRAEVDTFMFEGHDTTASGIS 329
            |:.|..:|.|..|    ...|..:.||.||.|:.| |:|||.:::|.|::||:|.|.|||.:.:|
  Fly   244 IEKRAKELLDMGE----PAGRAHNLLDTLLLAKFE-GQSLSRREIRDEINTFVFAGVDTTTAAMS 303

Mouse   330 WIFYALATNPEHQQRCRKEIQSLLGDGASITWNDLDK---MPYTTMCIKEALRIYPPVPSVSREL 391
            ::.||||..||.|.|.|||:|.:..|..:    |||.   :||....|||.||:|..||:..|: 
  Fly   304 FVLYALAKFPETQTRLRKELQDVALDETT----DLDALNGLPYLEALIKEVLRLYTIVPTTGRQ- 363

Mouse   392 SSPVTFPDGRSLPKGIHVMLSFYGLHHNPTVWPNPEVFDPSRFAP---GSSRHSHSFLPFSGGAR 453
            ::..|...||:...|:.:.::.|||.|:...:|:|..|.|.|:.|   ..:..:.|::|||||..
  Fly   364 TTQSTEIGGRTYCAGVTLWINMYGLAHDKEYYPDPYAFKPERWLPEDGAVAPPAFSYIPFSGGPH 428

Mouse   454 NCIGKQFAMNELKVAVALTLLRFELLPDPTRVPIPI-PRIVLKSKNGIHLHLKK 506
            .|||:::::..:|:..|..:..|::...|.:.|:.: .::|||::.||::...|
  Fly   429 VCIGRRYSLLLMKLLTARLVREFQMELSPEQAPLRLEAQMVLKAQQGINVSFLK 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4a12bNP_758510.2 CYP4B-like 70..503 CDD:410771 138/458 (30%)
Cyp311a1NP_572780.3 p450 30..480 CDD:278495 143/481 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.810

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