DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp4a12b and Cyp4ae1

DIOPT Version :9

Sequence 1:NP_758510.2 Gene:Cyp4a12b / 13118 MGIID:3611747 Length:508 Species:Mus musculus
Sequence 2:NP_525044.1 Gene:Cyp4ae1 / 31193 FlyBaseID:FBgn0015036 Length:496 Species:Drosophila melanogaster


Alignment Length:498 Identity:150/498 - (30%)
Similarity:255/498 - (51%) Gaps:32/498 - (6%)


- Green bases have known domain annotations that are detailed below.


Mouse    24 VLSLLLLLFKTAQLYLHR--QWLLSSTQQFPSPPSHWLFGHKILKDQDLQDILTR-IKNFPSACP 85
            |..|:..||:.|...|..  |.::.|..:.|...:.|..  :..:..:|.|.... :|.|..:..
  Fly    11 VTRLVASLFRLALKELRHPLQGVVPSVSRVPLLGAAWQM--RSFQPDNLHDKFAEYVKRFGRSFM 73

Mouse    86 QWLWGSKVRIQVYDPDYMKLIL-GRSDPKAHGSYRFLAPWIGRGLLLLDGQTWFQHRRMLTPAFH 149
            ..:.|..|.:.. :|.::..:| |:...|....|..|..|:|.||||..|:.|...|:::||.||
  Fly    74 GTVLGHVVMVTA-EPRHIDALLQGQHQLKKGTMYFALRGWLGDGLLLSRGKEWHTMRKIITPTFH 137

Mouse   150 YDILKPYTEIMADSVHVMLDKWEQIVGQDSTLEIFQHITLMTLDTIMKCAFSHEGSVQLDRK--Y 212
            :.||:.:.|:......:::::...:...:..:.|:..:.|..||.|.:.|.    .|.:|.:  .
  Fly   138 FSILEQFVEVFDRQSSILVERLRTLSYGNEVVNIYPLVGLAALDIITETAM----GVNVDAQGAD 198

Mouse   213 KSYIQAVEDLNNLF---FLRVRNIF-HQNDIIYRVSSNGCLANSACQLAHDHTDQVIKSRRSQLQ 273
            ...:.||:||.|:.   |:|...:| |...:.:........|...|  .|:.|:.:|:.||..|.
  Fly   199 SEVVHAVKDLTNILATRFMRPHLLFPHLFRLCWPSGFRKQQAGVIC--LHEFTNGIIEQRRRLLA 261

Mouse   274 DEEELEKLKKKRRLDFLDILLFARMENGKSLSDKDLRAEVDTFMFEGHDTTASGISWIFYALATN 338
            .|...:|..|...|  ||.||.|.:: |:.|:||.:|.||:||:|||||||.|.:|:..|.|:.:
  Fly   262 REANQDKPTKPHAL--LDTLLRATVD-GQPLTDKQIRDEVNTFIFEGHDTTTSAVSFCLYLLSRH 323

Mouse   339 PEHQQRCRKEIQSLLGDG--ASITWNDLDKMPYTTMCIKEALRIYPPVPSVSRELSSPVTFPDGR 401
            ...||:..:|::...|..  ..:..:|...:||.:..:||:||:|||:|:|:|.|...:...:| 
  Fly   324 EAVQQKLFEELRMHYGQDLFRGVILSDFATLPYLSCVVKESLRLYPPIPAVARCLEKDLVIDEG- 387

Mouse   402 SLPKGIHVMLSFYGLHHNPTVWPNPEVFDPSRF----APGSSRHSHSFLPFSGGARNCIGKQFAM 462
            .:|.|.:|::..:.|..:..::.:|.||.|.|.    ||..|  .:|::|||.|.|||||::||:
  Fly   388 YIPVGTNVVVLLWQLLRDEAIFTDPLVFQPERHLGEEAPRLS--PYSYIPFSAGPRNCIGQKFAL 450

Mouse   463 NELKVAVALTLLRFELLPDPTRVPIPIPRIVLKSKNGIHLHLK 505
            .|:|..|...:..::|||....|. |..:|||:||:|:::.|:
  Fly   451 LEMKTMVTKVIRHYQLLPMGADVE-PSIKIVLRSKSGVNVGLR 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4a12bNP_758510.2 CYP4B-like 70..503 CDD:410771 139/446 (31%)
Cyp4ae1NP_525044.1 p450 35..486 CDD:278495 141/466 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167845020
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9GY
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000016
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X23
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.740

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