DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp4a12b and Cyp6a16

DIOPT Version :9

Sequence 1:NP_758510.2 Gene:Cyp4a12b / 13118 MGIID:3611747 Length:508 Species:Mus musculus
Sequence 2:NP_001285631.1 Gene:Cyp6a16 / 19836250 FlyBaseID:FBgn0031726 Length:500 Species:Drosophila melanogaster


Alignment Length:520 Identity:147/520 - (28%)
Similarity:241/520 - (46%) Gaps:59/520 - (11%)


- Green bases have known domain annotations that are detailed below.


Mouse    19 LQVASVLSLLLLLFKTAQLYLHRQWLLSSTQQFPSPPSHWLFGH-----KILKDQDLQDILTRIK 78
            |.:.|:||.||...:    |....|.|   :..|....|:||||     .:...:.||:.....:
  Fly     6 LLLTSLLSFLLGYLR----YRFTYWEL---RGIPQLRPHFLFGHFFRLQSVHYSELLQETYDAFR 63

Mouse    79 NFPSACPQWLWGSKVRIQVYDPDYMKLILGRS-----DPKA-HGSYRFLAPWIGRGLLLLDGQTW 137
            ........:::...:.: |.|.|.:|.:|.|.     |.:: ||.     | :...|..|.|:.|
  Fly    64 GSAKVAGTYVFLRPMAV-VLDLDLVKAVLIRDFNNFVDRRSFHGD-----P-LTANLFNLQGEEW 121

Mouse   138 FQHRRMLTPAFHYDILKPYTEIMADSVHVMLDKWEQIVG-QDSTLEIFQHITLMTLDTIMKCAFS 201
            ...|..|:|.|....:|.....::.....:...::::|| |.:.||:...:...|.|.|..|||.
  Fly   122 RNLRTKLSPTFTSGKMKYMFGTVSTVAQQLGGTFDELVGSQGAVLELHDLMARYTTDVIGSCAFG 186

Mouse   202 HEGSVQLDRKYKSYIQAVEDLNNLFFLRV-RNIFHQND-----IIYRVSSNGCLANSACQLAHDH 260
            .|.|...:.:.:             |.:| |.||..::     .|::::....||.....:...|
  Fly   187 TECSSLREPQAE-------------FRQVGRRIFRNSNRSIRWRIFKMTYLSSLAKLGLPVRILH 238

Mouse   261 TDQVIKSRRSQLQDEEELEKLKKKRRLDFLDILL-FARMENGKSLSDKDLRAEVDTFMFEGHDTT 324
            .| :.|.....:::..||.:.:..||.||:|:|| ..|.||||.|:.:.:.|:...|...|.:|:
  Fly   239 PD-ITKFFNRIVRETVELRERENIRRNDFMDLLLDLRRQENGKGLTMEQMAAQAFVFFVAGFETS 302

Mouse   325 ASGISWIFYALATNPEHQQRCRKEIQSLLGDGASITWNDLDKMPYTTMCIKEALRIYPPVPSVSR 389
            :|.:|:..:.||.|.:.||:.|.||...:|....:|:..:.:|||....|.|.||.||.:.|::|
  Fly   303 SSNMSYALFELAKNQDVQQKLRMEINDSIGKHGKLTYEAMMEMPYLDQTITETLRKYPALSSLTR 367

Mouse   390 ELSS--PVTFPDGRS---LPKGIHVMLSFYGLHHNPTVWPNPEVFDPSRFAPGSSRHSH--SFLP 447
            ..|.  .:..|||..   |.||..|.:....:|::|.|:|.|..|.|.||||.:.|..|  :||.
  Fly   368 LASEDYEIPSPDGGDPVVLEKGTSVHIPVLAIHYDPEVYPEPHEFRPERFAPDACRERHPTAFLG 432

Mouse   448 FSGGARNCIGKQFAMNELKVAVALTLL---RFELLP-DPTRVPIPIPRIVLKSKNGIHLHLKKLQ 508
            |..|.|||||.:|...::||.: :|||   ||.|.| .||::.:....::|...:|:.|.:..::
  Fly   433 FGDGPRNCIGLRFGRMQVKVGL-ITLLRRFRFSLPPGSPTQLKVTKRNLILLPSDGVRLQVDPVE 496

Mouse   509  508
              Fly   497  496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp4a12bNP_758510.2 CYP4B-like 70..503 CDD:410771 131/457 (29%)
Cyp6a16NP_001285631.1 p450 32..492 CDD:278495 138/481 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.