DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp46a1 and Cyp4p1

DIOPT Version :9

Sequence 1:NP_034140.1 Gene:Cyp46a1 / 13116 MGIID:1341877 Length:500 Species:Mus musculus
Sequence 2:NP_524828.1 Gene:Cyp4p1 / 45524 FlyBaseID:FBgn0015037 Length:513 Species:Drosophila melanogaster


Alignment Length:532 Identity:114/532 - (21%)
Similarity:223/532 - (41%) Gaps:93/532 - (17%)


- Green bases have known domain annotations that are detailed below.


Mouse    12 VLLAFGLCCTFVHRARSRYEHIPGPPRPSFLLGHLPYFWK----KD------------------- 53
            ::||......::|||...| ||            |.:|.|    ||                   
  Fly     6 LILALSALLYWLHRANKDY-HI------------LSFFTKRIRLKDGTPVEIIAPIAKGKTIFGN 57

Mouse    54 --EDCGRVLQDVF---LDWAKKYGPVVRVNVFYKTSVIVTSPESVKKFLMSTKYNKDSKMYRALQ 113
              :..||....||   .:.||:.|......||.|....:...:|.:..|     |..:.:.:.|.
  Fly    58 TLDLYGRDHAGVFNYSRERAKEMGTSYIEYVFGKAIYNIIDADSAENVL-----NHPNLITKGLV 117

Mouse   114 TVFGERLFGQGLVSECDYGRWYKQRKVMDLAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPV 178
            ..|.......||::... .:|:.:||::...|..:.|....|.|..::::.  :|:.:...:..:
  Fly   118 YNFLHPFLRTGLLTSTG-KKWHARRKMLTPTFHFNILNQFQEIFKTESQKF--LLQFEGQDEVTI 179

Mouse   179 SMQDMLTCATIDILAKAAFGMETSMLLGAQK------PLSQAVKVMLEGISAS---RNTLAKFMP 234
            ::.|::...|::.:.:.|.|::...:  |:|      ..||..:..:..:|..   .:.|.:...
  Fly   180 TLHDVIPRFTLNSICETAMGVKLDEM--AEKGDRYRENFSQIEECFIRRLSNPLLWGDKLFEMFA 242

Mouse   235 GKRKQLREIRESIRLLRQVGKDWVQRRREALKRGEDMPAD--------------ILTQILKAEEG 285
            .|     :...::.::.:...:.:.:||:.||...|..:.              :|..::.||:.
  Fly   243 AK-----DFASALDVVHRFSSEIIAKRRDLLKDELDKSSSTADDDGFVSKKRFAMLDTLIYAEKD 302

Mouse   286 AQDDEV-LLDNFVTFFIAGHETSANHLAFTVMELSRQPE----IVARLQAEVDEVVGSKRHLDYE 345
            ...|.: :.:...|....|::|::..|.|.:|.:|..|:    ....:|..:|:.:.   :||..
  Fly   303 GLIDHIGICEEVDTLMFEGYDTTSIGLIFGLMNMSLNPDKQELCYQEIQEHIDDDLS---NLDVG 364

Mouse   346 DLGRLQYLSQVLKESLRLYP--PAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDP 408
            .|.:|:||...:||:.||:|  |..|. ..::|..|.:|:.:|....:....:.:.|...|::.|
  Fly   365 QLNKLKYLEYFMKETTRLFPSVPIMGR-EAVQETELANGLILPKGAQITIHVFDIHRNAKYWDSP 428

Mouse   409 LTFNPDRFGPGAPKPRFT--YFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRIE-FRLVPGQRFGL 470
            ..|.|:||.|...:.|.|  |.|||.|.|:|||:::|..|:|.:|..||::.: .:.:..|:...
  Fly   429 EEFRPERFLPENVQDRHTYAYVPFSAGQRNCIGKKYAMQEMKTLMVVLLKQFKVLKAIDPQKIVF 493

Mouse   471 QEQATLKPLDPV 482
            ....||:..|.:
  Fly   494 HTGITLRTQDKI 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp46a1NP_034140.1 p450 34..466 CDD:278495 102/492 (21%)
Cyp4p1NP_524828.1 p450 54..509 CDD:278495 101/471 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.