DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp46a1 and Cyp4c3

DIOPT Version :9

Sequence 1:NP_034140.1 Gene:Cyp46a1 / 13116 MGIID:1341877 Length:500 Species:Mus musculus
Sequence 2:NP_524598.1 Gene:Cyp4c3 / 43663 FlyBaseID:FBgn0015032 Length:535 Species:Drosophila melanogaster


Alignment Length:536 Identity:143/536 - (26%)
Similarity:235/536 - (43%) Gaps:83/536 - (15%)


- Green bases have known domain annotations that are detailed below.


Mouse     5 LLLLGSAVLLAFGLCCTFVHRARSR----YEHIPGPPRPSFLLGHLPYFWKKDEDCGRVLQDVFL 65
            :.||||.::.     ....::.|||    .|.||||....||...:......||...||     :
  Fly    31 VFLLGSILIF-----LVVYNKRRSRLVKYIEKIPGPAAMPFLGNAIEMNVDHDELFNRV-----I 85

Mouse    66 DWAKKYGPVVRVN-VFYKTS--VIVTSPESVKKFLMSTKYNKDSKMYRALQTVFGERLFGQGLVS 127
            ...|.:|..:.:| |:..|:  |::..||:|:..|.|.|:...|..|..|....||     ||::
  Fly    86 GMQKLWGTRIGINRVWQGTAPRVLLFEPETVEPILNSQKFVNKSHDYDYLHPWLGE-----GLLT 145

Mouse   128 ECDYGRWYKQRKVMDLAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPVSMQDMLTCATIDIL 192
            ..| .:|:.:||::..||....|...::.|||::..|...|..:. |....::...:|..|:||:
  Fly   146 STD-RKWHSRRKILTPAFHFKILDDFIDVFNEQSAVLARKLAVEV-GSEAFNLFPYVTLCTLDIV 208

Mouse   193 AKAAFGMETSMLLGAQKPLSQAV------------KVMLE-----GISASR-------NTLAKFM 233
            .:.|.|........::....:||            |:.|:     .::|..       |||..| 
  Fly   209 CETAMGRRIYAQSNSESEYVKAVYGIGSIVQSRQAKIWLQSDFIFSLTAEYKLHQSYINTLHGF- 272

Mouse   234 PGKRKQLREIRESIRLLRQ---------------VGKDWVQRRREALKRGEDMPADILTQILKAE 283
              ....:||.:..:.:|::               |||    ::|.|.       .|:|....| |
  Fly   273 --SNMVIRERKAELAILQENNNNNNNNAPDAYDDVGK----KKRLAF-------LDLLIDASK-E 323

Mouse   284 EGAQDDEVLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVVGSKRH--LDYED 346
            .....:|.:.:...||...||:|::..:::|:..|...||...|:..|:|.:.|..:.  ...::
  Fly   324 GTVLSNEDIREEVDTFMFEGHDTTSAAISWTLFLLGCHPEYQERVVEELDSIFGDDKETPATMKN 388

Mouse   347 LGRLQYLSQVLKESLRLYPPAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTF 411
            |..::||...:|:||||:|......|::.|:..|.|..||..|..:..||.:.|....|..|..|
  Fly   389 LMDMRYLECCIKDSLRLFPSVPMMARMVGEDVNIGGKIVPAGTQAIIMTYALHRNPRVFPKPEQF 453

Mouse   412 NPDRFGPG--APKPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRIEFRLVPGQR-FGLQEQ 473
            |||.|.|.  |.:..|.|.|||.|.|:||||:||.:|.|.|::.:|::.:...|..:. ..|..:
  Fly   454 NPDNFLPENCAGRHPFAYIPFSAGPRNCIGQKFAILEEKAVISTVLRKYKIEAVDRREDLTLLGE 518

Mouse   474 ATLKPLDPVLCTLRPR 489
            ..|:|.|.:...:.||
  Fly   519 LILRPKDGLRVKITPR 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp46a1NP_034140.1 p450 34..466 CDD:278495 128/477 (27%)
Cyp4c3NP_524598.1 p450 59..531 CDD:278495 132/498 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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