DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp46a1 and Cyp4d1

DIOPT Version :9

Sequence 1:NP_034140.1 Gene:Cyp46a1 / 13116 MGIID:1341877 Length:500 Species:Mus musculus
Sequence 2:NP_476907.2 Gene:Cyp4d1 / 31188 FlyBaseID:FBgn0005670 Length:512 Species:Drosophila melanogaster


Alignment Length:534 Identity:142/534 - (26%)
Similarity:248/534 - (46%) Gaps:82/534 - (15%)


- Green bases have known domain annotations that are detailed below.


Mouse     7 LLGSAVLLAFGLCCTFVHRARSRYEHIPGPP-RPSFLLGHLPYFWKKDEDCGRVLQDVFLDWAKK 70
            :|.||:.:...|......|......::|||| .|  |:||..:|..|...  .:::.:| ::.:.
  Fly     8 ILASALFVGLLLYHLKFKRLIDLISYMPGPPVLP--LVGHGHHFIGKPPH--EMVKKIF-EFMET 67

Mouse    71 YG--PVVRVNVFYKTSVIVTSPESVKKFLMSTKYNKDSKMYRALQTVFGERLFGQGLVSECDYGR 133
            |.  .|::|.:..:.:|::.:|:.|:..|.:.::|..:..|:||:....|.|    |||.   ||
  Fly    68 YSKDQVLKVWLGPELNVLMGNPKDVEVVLGTLRFNDKAGEYKALEPWLKEGL----LVSR---GR 125

Mouse   134 -WYKQRKVMDLAFSRSSLVSLMETFNEKAEQLVEILEAK--ADGQTPVSMQDMLTCATIDILAKA 195
             |:|:||::..||....|...:|.|.:.:..|:..:|..  ..|.:..|:.|.:...|:|.:.:.
  Fly   126 KWHKRRKIITPAFHFKILDQFVEVFEKGSRDLLRNMEQDRLKHGDSGFSLYDWINLCTMDTICET 190

Mouse   196 AFGMETSMLLGAQKPLSQAVKVMLEGISASR--NTLAKF------MPGKRKQLREIRESIRLLRQ 252
            |.|:..:....|.....||||. :..:...|  |.|.:|      .|..|.:    ::::.:|.|
  Fly   191 AMGVSINAQSNADSEYVQAVKT-ISMVLHKRMFNILYRFDLTYMLTPLARAE----KKALNVLHQ 250

Mouse   253 -VGKDWVQRRREALKRGEDMPADILTQILKAEEGAQDD------------EVLLDNFV------- 297
             ..|..||||.|.::.|            .::|.:.||            ::||.:.|       
  Fly   251 FTEKIIVQRREELIREG------------SSQESSNDDADVGAKRKMAFLDILLQSTVDERPLSN 303

Mouse   298 --------TFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVVGSKRH--LDYEDLGRLQY 352
                    ||...||:|:::.|.|....::..||...:...|:..|||:.:.  :.||.|.:|.|
  Fly   304 LDIREEVDTFMFEGHDTTSSALMFFFYNIATHPEAQKKCFEEIRSVVGNDKSTPVSYELLNQLHY 368

Mouse   353 LSQVLKESLRLYP--PAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDR 415
            :...:||:||:||  |..|  |.:.|:..|:|..:|..|.:..|...:||.:..|.:|..|.|:|
  Fly   369 VDLCVKETLRMYPSVPLLG--RKVLEDCEINGKLIPAGTNIGISPLYLGRREELFSEPNIFKPER 431

Mouse   416 FGPGAPKPR---FTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRIEFRLV--PGQRFGLQEQAT 475
            |.......:   :.|.|||.|.|:||||:||.:|:|.::|.:|:..|...|  ..:...|..:..
  Fly   432 FDVVTTAEKLNPYAYIPFSAGPRNCIGQKFAMLEIKAIVANVLRHYEVDFVGDSSEPPVLIAELI 496

Mouse   476 LKPLDPVLCTLRPR 489
            |:..:|::..:|.|
  Fly   497 LRTKEPLMFKVRER 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp46a1NP_034140.1 p450 34..466 CDD:278495 132/482 (27%)
Cyp4d1NP_476907.2 p450 35..507 CDD:278495 135/502 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.