DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp27b1 and Cyp12a4

DIOPT Version :9

Sequence 1:NP_034139.2 Gene:Cyp27b1 / 13115 MGIID:1098274 Length:507 Species:Mus musculus
Sequence 2:NP_650783.2 Gene:Cyp12a4 / 42294 FlyBaseID:FBgn0038681 Length:536 Species:Drosophila melanogaster


Alignment Length:522 Identity:134/522 - (25%)
Similarity:229/522 - (43%) Gaps:83/522 - (15%)


- Green bases have known domain annotations that are detailed below.


Mouse    35 RSLSDIPGPSTLSFLAELFCKGGLSRLHEL-QVHGAAR--YGPIW--SGSFGTLRTVYVADPTLV 94
            :....||..:..:...::...||..:..|| ::..|.|  ||.|:  .|..|....:...:|...
  Fly    45 KPFEQIPRLNMWALSMKMSMPGGKYKNMELMEMFEAMRQDYGDIFFMPGIMGNPPFLSTHNPQDF 109

Mouse    95 EQLLRQESHCPERCSFSSWAEHRRR-----HQRACGLLTADGEEWQRLRSLLAPLLLRPQAAAGY 154
            |.:.|.|...|.|....:...||..     :|...|::...|:.|...|:::.|:|::|:....|
  Fly   110 EVVFRNEGVWPNRPGNYTLLYHREEYRKDFYQGVMGVIPTQGKPWGDFRTVVNPVLMQPKNVRLY 174

Mouse   155 AGTLDNVVRDLVRRLRRQRGRGSGLPGLVLDVAGEFY----KFGLESIGAVLLGSRLGCLE-AEV 214
            ...:..|.::.|:|:...|...:      |:...:|.    ::.|||:..|.|..:||.|: :..
  Fly   175 YKKMSQVNQEFVQRILELRDPDT------LEAPDDFIDTINRWTLESVSVVALDKQLGLLKNSNK 233

Mouse   215 PPDTETFIHAVGSVFVSTL-LTMAMPNWLHHLIPGPW--------ARLCRDWDQM----FAFAQR 266
            ..:.....|.:...|:.:: |.|.         |.||        .||.|..|.:    .|:...
  Fly   234 ESEALKLFHYLDEFFIVSIDLEMK---------PSPWRYIKTPKLKRLMRALDGIQEVTLAYVDE 289

Mouse   267 HVELREGEAAMRNQG--KPEEDMPSGHHLTHFLFREKVSVQSIVGNV--TELLLAGVDTVSNTLS 327
            .:|..:.||   .:|  :||.:..        :..:.:.|...|..|  .::|:|||||.|:|.:
  Fly   290 AIERLDKEA---KEGVVRPENEQS--------VLEKLLKVDRKVATVMAMDMLMAGVDTTSSTFT 343

Mouse   328 WTLYELSRHPDVQTALHSEITAGTRGSCAHPHGTALSQLPLLKAVIKEVLRLYPVVPGNSRVPDR 392
            ..|..|:::|:.|..|..|:........:.....::..:|.|:|.|||..||:|::.||:||..|
  Fly   344 ALLLCLAKNPEKQARLREEVMKVLPNKNSEFTEASMKNVPYLRACIKESQRLHPLIVGNARVLAR 408

Mouse   393 DIRVGNYVIPQDTLVSLCHY-ATSRDPTQFPDPNSFNPARWL-----GEGPTP-------HPFAS 444
            |..:..|.:|..|.|::... |.:|| ..||..:.|.|.|||     .|...|       :||..
  Fly   409 DAVLSGYRVPAGTYVNIVPLNALTRD-EYFPQASEFLPERWLRSPKDSESKCPANELKSTNPFVF 472

Mouse   445 LPFGFGKRSCIGRRLAELELQMALSQILTHFEV---LPEPGALPIKPMTRTVLV--PERSINLQF 504
            ||||||.|.|:|:|:.|:||::..::::.:|.|   .|...|.      |:.|:  |...:..:|
  Fly   473 LPFGFGPRMCVGKRIVEMELELGTARLIRNFNVEFNYPTENAF------RSALINLPNIPLKFKF 531

Mouse   505 VD 506
            :|
  Fly   532 ID 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp27b1NP_034139.2 p450 41..504 CDD:278495 131/512 (26%)
Cyp12a4NP_650783.2 p450 72..531 CDD:299894 128/491 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 190 1.000 Domainoid score I3255
eggNOG 1 0.900 - - E2759_KOG0159
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 196 1.000 Inparanoid score I3800
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48087
OrthoDB 1 1.010 - - D185685at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8705
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X156
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.880

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