DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp3a16 and Cyp4c3

DIOPT Version :9

Sequence 1:NP_031846.2 Gene:Cyp3a16 / 13114 MGIID:106099 Length:504 Species:Mus musculus
Sequence 2:NP_524598.1 Gene:Cyp4c3 / 43663 FlyBaseID:FBgn0015032 Length:535 Species:Drosophila melanogaster


Alignment Length:539 Identity:143/539 - (26%)
Similarity:261/539 - (48%) Gaps:68/539 - (12%)


- Green bases have known domain annotations that are detailed below.


Mouse     3 LFSALSLDTLVLLAIILVLLYRYGTCTHGLFKK-QGIPGPKPLPFLGTVLNYYKGLWKFDMECYE 66
            :.|..|..|:.||..||:.|..|......|.|. :.||||..:||||..:       :.:::..|
  Fly    22 VISGYSPITVFLLGSILIFLVVYNKRRSRLVKYIEKIPGPAAMPFLGNAI-------EMNVDHDE 79

Mouse    67 KYG------KTWG-------LFDGQIPLFVITDPETIKNVLVKECFSVFTNRQDFFPVGIMSKSI 118
            .:.      |.||       ::.|..|..::.:|||::.:|..:.|...::..|:.... :.:.:
  Fly    80 LFNRVIGMQKLWGTRIGINRVWQGTAPRVLLFEPETVEPILNSQKFVNKSHDYDYLHPW-LGEGL 143

Mouse   119 SLAKDEEWKRYRALLSPTFTSGNLKEMFPVIEQYGDILVKYLRQEAEKGKPVAVKDVLGAY---- 179
            ..:.|.:|...|.:|:|.|       .|.:::.:.|:   :..|.|...:.:||:....|:    
  Fly   144 LTSTDRKWHSRRKILTPAF-------HFKILDDFIDV---FNEQSAVLARKLAVEVGSEAFNLFP 198

Mouse   180 -----SMDVIISTTFGVNIDSLNNPEDPFVE------------NAKKVLRFDYFDPLSLSVALF- 226
                 ::|::..|..|..|.:.:|.|..:|:            .||..|:.|:...|:....|. 
  Fly   199 YVTLCTLDIVCETAMGRRIYAQSNSESEYVKAVYGIGSIVQSRQAKIWLQSDFIFSLTAEYKLHQ 263

Mouse   227 PFLTPIYEMLNICMFP-KDSIEFFKKFVDRMTENRLDS----KQKHRVDFIYLMMEAYNKSKDKD 286
            .::..::...|:.:.. |..:...::..:....|..|:    .:|.|:.|:.|:::|   ||:  
  Fly   264 SYINTLHGFSNMVIRERKAELAILQENNNNNNNNAPDAYDDVGKKKRLAFLDLLIDA---SKE-- 323

Mouse   287 SHKALSEIEITAQSIIFIFAGYETTSSILSFTVYSLATHPDIQKKLQEEIDEAL--PNKAPPTYD 349
             ...||..:|..:...|:|.|::|||:.:|:|::.|..||:.|:::.||:|...  ..:.|.|..
  Fly   324 -GTVLSNEDIREEVDTFMFEGHDTTSAAISWTLFLLGCHPEYQERVVEELDSIFGDDKETPATMK 387

Mouse   350 TVMAMEYLDMVLNETLRLYPITNRLQRVCKKDVEINGIYIPKGSTVIIPSYVLHHDPQHWPEPEE 414
            .:|.|.||:..:.::|||:|....:.|:..:||.|.|..:|.|:..||.:|.||.:|:.:|:||:
  Fly   388 NLMDMRYLECCIKDSLRLFPSVPMMARMVGEDVNIGGKIVPAGTQAIIMTYALHRNPRVFPKPEQ 452

Mouse   415 FQPERFSKENKGSIDPYVYLPFGNGPRNCIGMRFALMNMKLALIKVLQNFSFQPCKETQIPLKLS 479
            |.|:.|..||.....|:.|:||..|||||||.:||::..|..:..||:.:..:.....: .|.|.
  Fly   453 FNPDNFLPENCAGRHPFAYIPFSAGPRNCIGQKFAILEEKAVISTVLRKYKIEAVDRRE-DLTLL 516

Mouse   480 RELLLQPVKPIVLKVVPRD 498
            .||:|:|...:.:|:.|||
  Fly   517 GELILRPKDGLRVKITPRD 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp3a16NP_031846.2 p450 39..494 CDD:278495 127/496 (26%)
Cyp4c3NP_524598.1 p450 59..531 CDD:278495 127/496 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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