DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp3a16 and Cyp28d1

DIOPT Version :9

Sequence 1:NP_031846.2 Gene:Cyp3a16 / 13114 MGIID:106099 Length:504 Species:Mus musculus
Sequence 2:NP_608912.1 Gene:Cyp28d1 / 33749 FlyBaseID:FBgn0031689 Length:502 Species:Drosophila melanogaster


Alignment Length:484 Identity:143/484 - (29%)
Similarity:250/484 - (51%) Gaps:37/484 - (7%)


- Green bases have known domain annotations that are detailed below.


Mouse    12 LVLLAIILVLLYRYGTCTHGLFKKQGIPGPKPLPFLGTVLNYY--KGLWKFDM-ECYEKYGKT-- 71
            |.::|.||.|:|.:.|.....:||:|||..|..||:|:..:.:  |....:|: |.||:|..|  
  Fly     8 LFVIAAILALIYVFLTWNFSYWKKRGIPTAKSWPFVGSFPSVFTQKRNVVYDIDEIYEQYKNTDS 72

Mouse    72 -WGLFDGQIPLFVITDPETIKNVLVKECFSVFTNRQDFFPVG----IMSKSISLAKDEEWKRYRA 131
             .|:|..:||..::|.||....:.|.:..|...|....|...    |::.:..:...|.||..||
  Fly    73 IVGVFQTRIPQLMVTTPEYAHKIYVSDFRSFHDNEMAKFTDSKTDPILANNPFVLTGEAWKERRA 137

Mouse   132 LLSPTFTSGNLKEMFPVIEQYGDILVKYLRQEA--EKGKPVAVKDVLGAYSMDVIISTTFGVNID 194
            .::|..::..:|..:||..:.....|:|:|:::  ...:.:..||:...|:.:||.....|::..
  Fly   138 EVTPGLSANRVKAAYPVSLRVCKKFVEYIRRQSLMAPAQGLNAKDLCLCYTTEVISDCVLGISAQ 202

Mouse   195 SLNNPEDPFVENAKKVLRFDY-FDPLSLSVALFPFLTPIYEMLNICMFPKDSIEFFKKFVDRMTE 258
            |..:...|.|...|:|....: |...::...|:|   ||.:..::.:|.||...||...:.:..:
  Fly   203 SFTDNPTPMVGMTKRVFEQSFGFIFYTVVANLWP---PITKFYSVSLFAKDVAAFFYDLMQKCIQ 264

Mouse   259 NRLDS-KQKHRVDFIYLMMEAYNKSKDKDSHKALSEIEITAQSIIFIFAGYETTSSILSFTVYSL 322
            .|.:| ..:.|.||:..|::...|       |.|:..|:|:.::.|:..|:|||:.:|:.|:..|
  Fly   265 VRRESPAAQQRDDFLNYMLQLQEK-------KGLNAAELTSHTMTFLTDGFETTAQVLTHTLLFL 322

Mouse   323 ATHPDIQKKLQEEIDEALPNKAPPTYDTVMAMEYLDMVLNETLRLYPITNRLQRVCKKDVEI--- 384
            |.:|..|.||:|||     ..|..|::.:..:.:.:..::||||::......::|..:..|:   
  Fly   323 ARNPKEQMKLREEI-----GTAELTFEQISELPFTEACIHETLRIFSPVLAARKVVTEPCELTNK 382

Mouse   385 NGIYIP--KGSTVIIPSYVLHHDPQHWPEPEEFQPERFSKENKGS---IDPYVYLPFGNGPRNCI 444
            ||:.:.  .|..||||...||||||::.||:.|:||||...|.|:   .|..::..||:|||.|.
  Fly   383 NGVSVKLRPGDVVIIPVNALHHDPQYYEEPQSFKPERFLNINGGAKKYRDQGLFFGFGDGPRICP 447

Mouse   445 GMRFALMNMKLALIKVLQNFSFQPCKETQ 473
            ||||:|..:|.||:::::||..:...:|:
  Fly   448 GMRFSLTQIKAALVEIVRNFDIKVNPKTR 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp3a16NP_031846.2 p450 39..494 CDD:278495 132/457 (29%)
Cyp28d1NP_608912.1 p450 35..477 CDD:278495 132/457 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0158
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X40
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.820

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