DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp3a16 and Cyp4s3

DIOPT Version :9

Sequence 1:NP_031846.2 Gene:Cyp3a16 / 13114 MGIID:106099 Length:504 Species:Mus musculus
Sequence 2:NP_573003.2 Gene:Cyp4s3 / 32444 FlyBaseID:FBgn0030615 Length:495 Species:Drosophila melanogaster


Alignment Length:539 Identity:138/539 - (25%)
Similarity:248/539 - (46%) Gaps:99/539 - (18%)


- Green bases have known domain annotations that are detailed below.


Mouse     9 LDTLVLLAIIL-VLLYRYGTCTHGLFKKQ----GIPGPKPLPFL-----GTVLNYYKGLWKFDME 63
            :.||.|:|.:| ....||........:.|    .:|||.....:     |.:||:.|       |
  Fly     1 MSTLALVAFVLWAAFLRYLPKILNFLRLQRFAKTLPGPTIGELIANVKKGEILNWLK-------E 58

Mouse    64 CYEKYGKTWGLFDGQIPLFVITDPETIKNVLVKECFSVFTNRQDF------FPVGIMSKSISLAK 122
            ..||:|..:.::.|:..:.:.||||.||.:|...  .:.|..:::      ...|:::..     
  Fly    59 LREKHGPVFRIWFGKDLMVMFTDPEDIKQLLGNN--QLLTKSRNYELLEPWLGKGLLTNG----- 116

Mouse   123 DEEWKRYRALLSPTFTSGNLKEMFPVIEQYGDILVKYLRQEAEKGKPVAVKDVLGAYSMDVIIST 187
            .|.|.|.|.||:|.|....|.|....:|:...|||:.||.:| .|:...:...:..:::|.|..|
  Fly   117 GESWHRRRKLLTPGFHFRILSEFKEPMEENCRILVRRLRTKA-NGESFDIYPYITLFALDAICET 180

Mouse   188 TFGVNIDSLNNPEDPFVENAKKVLRFDYFDPLSLSVALFPFLTPIYEMLNICMFPKDSIEFFK-- 250
            ..|:...:....:..:|:..:.:.|..:....|           .::.||:         |||  
  Fly   181 AMGIKKHAQLQSDSEYVQAVQSICRVMHKQSFS-----------FWQRLNV---------FFKHT 225

Mouse   251 --------------------------KFVDRMTENRLDSKQ-----KHRVDFIYLMMEAYNKSKD 284
                                      :.:....|.:.:::|     |.|:.|:.:::     ...
  Fly   226 KPGKEREAALKVLHDETNRVIRLRREQLIQERNEWKPEAEQDDVGAKRRLAFLDMLL-----LTQ 285

Mouse   285 KDSHKALSEIEITAQSIIFIFAGYETTSSILSFTVYSLATHPDIQKKLQEEIDEALPNKAPPTYD 349
            .:....||:.:|..:...|:|.|::||||.::|.:..|:.:||:|::..||..|....:..    
  Fly   286 MEGGAELSDTDIREEVDTFMFEGHDTTSSAIAFALSLLSKNPDVQQRAFEEASELEGREKE---- 346

Mouse   350 TVMAMEYLDMVLNETLRLYPITNRLQRVCKKDVEINGIYIPKGSTVIIPSYVLHHDPQHWPEPEE 414
               :|.||:.|:.||||:||......|...:|:|:..:.:|||:::....|:||.||:::|:||.
  Fly   347 ---SMPYLEAVIKETLRIYPSVPFFSRKVLEDLEVGKLTVPKGASISCLIYMLHRDPKNFPDPER 408

Mouse   415 FQPERFSKENKGSIDPYVYLPFGNGPRNCIGMRFALMNMKLALIKVLQNFSFQPCKETQIPLKLS 479
            |.|:|| ..|:..:.|:.:..|..|||||||.:||::.:|.:|..:|:::.|.|.|:.| |..|:
  Fly   409 FDPDRF-LVNEKQMHPFAFAAFSAGPRNCIGQKFAMLELKTSLAMLLRSYRFLPDKDHQ-PKPLA 471

Mouse   480 RELLLQPVKPIVLKVVPRD 498
             ||:.:....|.|:::|||
  Fly   472 -ELVTKSGNGIRLRILPRD 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp3a16NP_031846.2 p450 39..494 CDD:278495 127/498 (26%)
Cyp4s3NP_573003.2 p450 35..469 CDD:278495 122/482 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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