DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp3a13 and Cyp4p1

DIOPT Version :9

Sequence 1:NP_031845.1 Gene:Cyp3a13 / 13113 MGIID:88610 Length:503 Species:Mus musculus
Sequence 2:NP_524828.1 Gene:Cyp4p1 / 45524 FlyBaseID:FBgn0015037 Length:513 Species:Drosophila melanogaster


Alignment Length:543 Identity:145/543 - (26%)
Similarity:251/543 - (46%) Gaps:93/543 - (17%)


- Green bases have known domain annotations that are detailed below.


Mouse    12 WMLLATSLVLLYLYGT----HSHGIF-KKLGIPGPKPLP-----------FLGTILAYQK---GF 57
            |::||.|.:|.:|:..    |....| |::.:....|:.           |..|:..|.:   |.
  Fly     5 WLILALSALLYWLHRANKDYHILSFFTKRIRLKDGTPVEIIAPIAKGKTIFGNTLDLYGRDHAGV 69

Mouse    58 WECDIQCHKKYGKMWGLYDGRQPVLAITDPDIIKTVL------VKECYSTFTNRRRFGPVGILKK 116
            :....:..|:.|..:..|...:.:..|.|.|..:.||      .|.....|.:       ..|:.
  Fly    70 FNYSRERAKEMGTSYIEYVFGKAIYNIIDADSAENVLNHPNLITKGLVYNFLH-------PFLRT 127

Mouse   117 AISISENEEWKRIRALLSPTFTSGRLKEMFPIINQFTDVLVRNMRQGL----GEGKPT-SMKDIF 176
            .:..|..::|...|.:|:|||       .|.|:|||.::.....::.|    |:.:.| ::.|:.
  Fly   128 GLLTSTGKKWHARRKMLTPTF-------HFNILNQFQEIFKTESQKFLLQFEGQDEVTITLHDVI 185

Mouse   177 GAYSMDVITATSFGVNIDSLNNPQDPFVE---KIKKLLKFDIFDPLFLSVTLFP-FLTPVF-DAL 236
            ..::::.|..|:.||.:|.:....|.:.|   :|::.....:.:||.....||. |....| .||
  Fly   186 PRFTLNSICETAMGVKLDEMAEKGDRYRENFSQIEECFIRRLSNPLLWGDKLFEMFAAKDFASAL 250

Mouse   237 NVSLFPRDVISFFTTSVERMKENRMKEK--------------EKQRVDFLQLMINSQNYKTKESH 287
                   ||:..|::.:...:.:.:|::              .|:|...|..:|    |..|:. 
  Fly   251 -------DVVHRFSSEIIAKRRDLLKDELDKSSSTADDDGFVSKKRFAMLDTLI----YAEKDG- 303

Mouse   288 KALSDVEIVAQSVIFIFAGYETTSSALSFALYLLAIHPDVQ----KKLQDEIDAALPNKAPATYD 348
             .:..:.|..:....:|.||:|||..|.|.|..::::||.|    :::|:.||..|.|   ....
  Fly   304 -LIDHIGICEEVDTLMFEGYDTTSIGLIFGLMNMSLNPDKQELCYQEIQEHIDDDLSN---LDVG 364

Mouse   349 TLLQMEYLDMVVNETLRLY---PIAGRLERVCKTDVEINGLFIPKGTVVMIPTFALHKDPKYWPE 410
            .|.:::||:..:.||.||:   ||.|| |.|.:|:: .|||.:|||..:.|..|.:|::.|||..
  Fly   365 QLNKLKYLEYFMKETTRLFPSVPIMGR-EAVQETEL-ANGLILPKGAQITIHVFDIHRNAKYWDS 427

Mouse   411 PEEFRPERFSKKNQDSINPYMYLPFGSGPRNCIGMRFALINMKVALVRVLQNFTVQPCKETEIPL 475
            |||||||||..:|....:.|.|:||.:|.|||||.::|:..||..:|.:|:.|.|....:   |.
  Fly   428 PEEFRPERFLPENVQDRHTYAYVPFSAGQRNCIGKKYAMQEMKTLMVVLLKQFKVLKAID---PQ 489

Mouse   476 KL-SKQGL-LQPENPLLLKVVSR 496
            |: ...|: |:.::.:.:|:|.|
  Fly   490 KIVFHTGITLRTQDKIRVKLVRR 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp3a13NP_031845.1 p450 39..491 CDD:365848 133/504 (26%)
Cyp4p1NP_524828.1 p450 54..509 CDD:278495 132/489 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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