DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp3a13 and Cyp4e1

DIOPT Version :9

Sequence 1:NP_031845.1 Gene:Cyp3a13 / 13113 MGIID:88610 Length:503 Species:Mus musculus
Sequence 2:NP_524771.1 Gene:Cyp4e1 / 44632 FlyBaseID:FBgn0015034 Length:531 Species:Drosophila melanogaster


Alignment Length:522 Identity:133/522 - (25%)
Similarity:245/522 - (46%) Gaps:82/522 - (15%)


- Green bases have known domain annotations that are detailed below.


Mouse    12 WMLLATSLVL-LYLYGTHSHGIFKKLGI----PGPKPLPFLGTILAYQK------------GFWE 59
            |::|...|.| |:|......|:.::..:    .||..||.:|.  |:|.            |:|.
  Fly     2 WIVLCAFLALPLFLVTYFELGLLRRKRMLNKFQGPSMLPLVGN--AHQMGNTPTEILNRFFGWWH 64

Mouse    60 CDIQCHKKYGK----MW-GLYDGRQPVLAITDPDIIKTVLVKECY----STFTNRRRFGPVGILK 115
                   :|||    .| |.|..    :.:|:|..::.:|..:..    ..:.....:..:|:| 
  Fly    65 -------EYGKDNFRYWIGYYSN----IMVTNPKYMEFILSSQTLISKSDVYDLTHPWLGLGLL- 117

Mouse   116 KAISISENEEWKRIRALLSPTFTSGRLKEMFPIINQFTDVLVRNMRQGLGEGKPTSMKDIFGAYS 180
                .|...:|.:.|.:::|.|....|::...::|:.:...:..:::....|.....::.....:
  Fly   118 ----TSTGSKWHKHRKMITPAFHFNILQDFHEVMNENSTKFIDQLKKVADGGNIFDFQEEAHYLT 178

Mouse   181 MDVITATSFGVNIDSLNNPQDPFVEKIKKL---LKFDIFDPLFLSVTLFPFLTPVFDALNVSL-- 240
            :|||..|:.||:|:::.|.....|:..|.:   :|...|.|...:..||.| .|.:...:.:|  
  Fly   179 LDVICDTAMGVSINAMENRSSSVVQAFKDITYTIKMRAFSPWKRNKYLFHF-APEYPEYSKTLKT 242

Mouse   241 ---FPRDVISFFTTSVERMKEN-----RMKEKEKQRVDFLQLMINSQNYKTKESHKALSDVEIVA 297
               |..::|:   ..:|..|..     :..|..::::.||..:::|     |...:.|:..|:..
  Fly   243 LQDFTNEIIA---KRIEVRKSGLEVGIKADEFSRKKMAFLDTLLSS-----KVDGRPLTSQELYE 299

Mouse   298 QSVIFIFAGYETTSSALSFALYLLAIHPDVQKKL---QDEIDAALPNKAPATYDTLLQMEYLDMV 359
            :...|:|.|::||:|.:.||:|||:.|||.|:||   |.::..|......||:..:..|::||:.
  Fly   300 EVSTFMFEGHDTTTSGVGFAVYLLSRHPDEQEKLFNEQCDVMGASGLGRDATFQEISTMKHLDLF 364

Mouse   360 VNETLRLYPIAGRLERVCKTDVEINGLFIPKGTVVMIPTFALHKDPKYWPEPEEFRPERFSKKNQ 424
            :.|..||||....:.|..:.|..|:|..:||||.:.:....|..:.:.:.:|.:|:||||.::..
  Fly   365 IKEAQRLYPSVPFIGRFTEKDYVIDGDIVPKGTTLNLGLLMLGYNDRVFKDPHKFQPERFDREKP 429

Mouse   425 DSINPYMYLPFGSGPRNCIGMRFALINMKVALVRVLQNFTVQPCKETEIPLKLSKQGL------L 483
               .|:.|:||.:|||||||.:|||:.:|..:.::::||.|.|..:..:    ||.|.      |
  Fly   430 ---GPFEYVPFSAGPRNCIGQKFALLEIKTVVSKIIRNFEVLPALDELV----SKDGYISTTLGL 487

Mouse   484 QP 485
            ||
  Fly   488 QP 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp3a13NP_031845.1 p450 39..491 CDD:365848 126/490 (26%)
Cyp4e1NP_524771.1 p450 34..469 CDD:278495 119/464 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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