DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp3a13 and Cyp4c3

DIOPT Version :9

Sequence 1:NP_031845.1 Gene:Cyp3a13 / 13113 MGIID:88610 Length:503 Species:Mus musculus
Sequence 2:NP_524598.1 Gene:Cyp4c3 / 43663 FlyBaseID:FBgn0015032 Length:535 Species:Drosophila melanogaster


Alignment Length:544 Identity:141/544 - (25%)
Similarity:261/544 - (47%) Gaps:79/544 - (14%)


- Green bases have known domain annotations that are detailed below.


Mouse     3 LIPNFSMETWMLLATSLVLLYLYGTHSHGIFKKL-GIPGPKPLPFLGTILAYQKGFWECDIQCHK 66
            :|..:|..|..||.:.|:.|.:|......:.|.: .||||..:||||..:       |.::...:
  Fly    22 VISGYSPITVFLLGSILIFLVVYNKRRSRLVKYIEKIPGPAAMPFLGNAI-------EMNVDHDE 79

Mouse    67 KYG------KMWG-------LYDGRQPVLAITDPDIIKTVLVKECYSTFTNRRR----FGPVGIL 114
            .:.      |:||       ::.|..|.:.:.:|:.::.:|..:   .|.|:..    ..|  .|
  Fly    80 LFNRVIGMQKLWGTRIGINRVWQGTAPRVLLFEPETVEPILNSQ---KFVNKSHDYDYLHP--WL 139

Mouse   115 KKAISISENEEWKRIRALLSPTFTSGRLKEMFPIINQFTDVLVRNMRQGLGEGKPTSMKDIFGAY 179
            .:.:..|.:.:|...|.:|:|.|....|.:...:.|:.:.||.|.:...:|       .:.|..:
  Fly   140 GEGLLTSTDRKWHSRRKILTPAFHFKILDDFIDVFNEQSAVLARKLAVEVG-------SEAFNLF 197

Mouse   180 ------SMDVITATSFGVNIDSLNNPQDPFVEKI------------KKLLKFDIFDPLFLSVTLF 226
                  ::|::..|:.|..|.:.:|.:..:|:.:            |..|:.|.   :|.....:
  Fly   198 PYVTLCTLDIVCETAMGRRIYAQSNSESEYVKAVYGIGSIVQSRQAKIWLQSDF---IFSLTAEY 259

Mouse   227 PFLTPVFDALNVSLFPRDVISFFTTSVERMKENRMKEK-----------EKQRVDFLQLMINSQN 280
            .......:.|:.  |...||......:..::||.....           :|:|:.||.|:|::..
  Fly   260 KLHQSYINTLHG--FSNMVIRERKAELAILQENNNNNNNNAPDAYDDVGKKKRLAFLDLLIDASK 322

Mouse   281 YKTKESHKALSDVEIVAQSVIFIFAGYETTSSALSFALYLLAIHPDVQKKLQDEIDAAL--PNKA 343
            ..|     .||:.:|..:...|:|.|::|||:|:|:.|:||..||:.|:::.:|:|:..  ..:.
  Fly   323 EGT-----VLSNEDIREEVDTFMFEGHDTTSAAISWTLFLLGCHPEYQERVVEELDSIFGDDKET 382

Mouse   344 PATYDTLLQMEYLDMVVNETLRLYPIAGRLERVCKTDVEINGLFIPKGTVVMIPTFALHKDPKYW 408
            |||...|:.|.||:..:.::|||:|....:.|:...||.|.|..:|.||..:|.|:|||::|:.:
  Fly   383 PATMKNLMDMRYLECCIKDSLRLFPSVPMMARMVGEDVNIGGKIVPAGTQAIIMTYALHRNPRVF 447

Mouse   409 PEPEEFRPERFSKKNQDSINPYMYLPFGSGPRNCIGMRFALINMKVALVRVLQNFTVQPCKETEI 473
            |:||:|.|:.|..:|....:|:.|:||.:|||||||.:||::..|..:..||:.:.::.....| 
  Fly   448 PKPEQFNPDNFLPENCAGRHPFAYIPFSAGPRNCIGQKFAILEEKAVISTVLRKYKIEAVDRRE- 511

Mouse   474 PLKLSKQGLLQPENPLLLKVVSRD 497
            .|.|..:.:|:|::.|.:|:..||
  Fly   512 DLTLLGELILRPKDGLRVKITPRD 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp3a13NP_031845.1 p450 39..491 CDD:365848 128/499 (26%)
Cyp4c3NP_524598.1 p450 59..531 CDD:278495 128/501 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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