DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp3a13 and Cyp4d8

DIOPT Version :9

Sequence 1:NP_031845.1 Gene:Cyp3a13 / 13113 MGIID:88610 Length:503 Species:Mus musculus
Sequence 2:NP_523961.2 Gene:Cyp4d8 / 38841 FlyBaseID:FBgn0015033 Length:505 Species:Drosophila melanogaster


Alignment Length:499 Identity:133/499 - (26%)
Similarity:238/499 - (47%) Gaps:67/499 - (13%)


- Green bases have known domain annotations that are detailed below.


Mouse    13 MLLATSLVLLYLYGTHSHGIFKKLG----------IPGPKPLPFLGT----ILAYQKGFWECDIQ 63
            |||...:|||:..|...|     ||          :|||...|.:|.    :....|.|.:...:
  Fly     1 MLLFLLVVLLFGAGWIIH-----LGQADRRRKVANLPGPICPPLIGAMQLMLRLNPKTFIKVGRE 60

Mouse    64 CHKKYGKMWGLYDGRQPVLAITDPDIIKTVLVKECYSTFTNRRRFGPVG-ILKKAISISENEEWK 127
            ...|:|.:..::...:.::...|.::.:.:|..:  ........:..:| .|...:.:|:.:.|.
  Fly    61 YVLKFGHLQRVWIFNRLLIMSGDAELNEQLLSSQ--EHLVKHPVYKVLGQWLGNGLLLSDGKVWH 123

Mouse   128 RIRALLSPTFTSGRLKEMFPIINQFTDVLVRNMRQGLGEGKPTSMKDIFGAYSMDVITATSFGVN 192
            :.|.:::|||....|::...:.:|.:::.|:.:.| ...|....:.....|.::|:|..|:.|..
  Fly   124 QRRKIITPTFHFSILEQFVEVFDQQSNICVQRLAQ-KANGNTFDVYRSICAAALDIIAETAMGTK 187

Mouse   193 IDSLNNPQDPFVEKIKK---LLKFDIFDPLFLSVTLFPFLTPVFDALNVSLFPRDVISFFTTSVE 254
            |.:..|...|:.|.:.:   ||.:. |..::|.|.|      :|...:..|..|.     |..:.
  Fly   188 IYAQANESTPYAEAVNECTALLSWR-FMSVYLQVEL------LFTLTHPHLKWRQ-----TQLIR 240

Mouse   255 RMKENRMK--EKEKQRVDFLQ--LMINSQNYKTKESHKALSDV--------------EIVAQSVI 301
            .|:|..:|  ||.:|.::..|  ||..:......:...||.||              ||..:...
  Fly   241 TMQEFTIKVIEKRRQALEDQQSKLMDTADEDVGSKRRMALLDVLLMSTVDGRPLTNDEIREEVDT 305

Mouse   302 FIFAGYETTSSALSFALYLLAIHPDVQKKLQDEIDAAL--PNKAPATYDTLLQMEYLDMVVNETL 364
            |:|.|::||:|||||.|:.|:.||:||.|:.:||...|  ....|.:...|.:::|::.|:.|:|
  Fly   306 FMFEGHDTTTSALSFCLHELSRHPEVQAKMLEEIVQVLGTDRSRPVSIRDLGELKYMECVIKESL 370

Mouse   365 RLYPIAGRLERVCKTD------VEINGLFIPKGTVVMIPTFALHKDPKYWPEPEEFRPERFSKKN 423
            |:||....:.|..:||      |..:|: ||.|:.::|..|.:|:.|:.:|.|:||.|||  .:|
  Fly   371 RMYPPVPIVGRKLQTDFKYTHSVHGDGV-IPAGSEIIIGIFGVHRQPETFPNPDEFIPER--HEN 432

Mouse   424 QDSINPYMYLPFGSGPRNCIGMRFALINMKVALVRVLQNFTVQP 467
            ...:.|:..:||.:|||||||.:||.:.||:.|.::::.:.:.|
  Fly   433 GSRVAPFKMIPFSAGPRNCIGQKFAQLEMKMMLAKIVREYELLP 476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp3a13NP_031845.1 p450 39..491 CDD:365848 123/463 (27%)
Cyp4d8NP_523961.2 CYP4 66..497 CDD:410721 115/429 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2429
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.