DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp3a13 and Cyp4s3

DIOPT Version :9

Sequence 1:NP_031845.1 Gene:Cyp3a13 / 13113 MGIID:88610 Length:503 Species:Mus musculus
Sequence 2:NP_573003.2 Gene:Cyp4s3 / 32444 FlyBaseID:FBgn0030615 Length:495 Species:Drosophila melanogaster


Alignment Length:509 Identity:136/509 - (26%)
Similarity:244/509 - (47%) Gaps:101/509 - (19%)


- Green bases have known domain annotations that are detailed below.


Mouse    38 IPGPKPLPFLGTILA-YQKG---FWECDIQCHKKYGKMWGLYDGRQPVLAITDPDIIKTVLVKEC 98
            :|||.    :|.::| .:||   .|..:::  :|:|.::.::.|:..::..|||:.||.:|... 
  Fly    35 LPGPT----IGELIANVKKGEILNWLKELR--EKHGPVFRIWFGKDLMVMFTDPEDIKQLLGNN- 92

Mouse    99 YSTFTNRRRFGPV-GILKKAISISENEEWKRIRALLSPTFTSGRLKEMFPIINQFTD-------V 155
             ...|..|.:..: ..|.|.:..:..|.|.|.|.||:|.|       .|.|:::|.:       :
  Fly    93 -QLLTKSRNYELLEPWLGKGLLTNGGESWHRRRKLLTPGF-------HFRILSEFKEPMEENCRI 149

Mouse   156 LVRNMRQGLGEGKPTSMKDIFGAYSMDVITATSFGVNIDSLNNPQDPFVEKIKKLLKFDIFDPLF 220
            |||.:|. ...|:...:......:::|.|..|:.|:...:.......:|:.::.:.:       .
  Fly   150 LVRRLRT-KANGESFDIYPYITLFALDAICETAMGIKKHAQLQSDSEYVQAVQSICR-------V 206

Mouse   221 LSVTLFPFLTPVFDALNVSLFPRDVISFF-------------------TTSVERMKENRMKEKE- 265
            :....|.|    :..|||         ||                   |..|.|::..::.::. 
  Fly   207 MHKQSFSF----WQRLNV---------FFKHTKPGKEREAALKVLHDETNRVIRLRREQLIQERN 258

Mouse   266 -------------KQRVDFLQLMINSQNYKTKESHKALSDVEIVAQSVIFIFAGYETTSSALSFA 317
                         |:|:.||.:::.:|    .|....|||.:|..:...|:|.|::|||||::||
  Fly   259 EWKPEAEQDDVGAKRRLAFLDMLLLTQ----MEGGAELSDTDIREEVDTFMFEGHDTTSSAIAFA 319

Mouse   318 LYLLAIHPDVQKKLQDEIDAALPNKAPATYDTLLQMEYLDMVVNETLRLYPIAGRLERVCKTDVE 382
            |.||:.:||||::..:|. :.|..:...:      |.||:.|:.||||:||......|....|:|
  Fly   320 LSLLSKNPDVQQRAFEEA-SELEGREKES------MPYLEAVIKETLRIYPSVPFFSRKVLEDLE 377

Mouse   383 INGLFIPKGTVVMIPTFALHKDPKYWPEPEEFRPERFSKKNQDSINPYMYLPFGSGPRNCIGMRF 447
            :..|.:|||..:....:.||:|||.:|:||.|.|:|| ..|:..::|:.:..|.:|||||||.:|
  Fly   378 VGKLTVPKGASISCLIYMLHRDPKNFPDPERFDPDRF-LVNEKQMHPFAFAAFSAGPRNCIGQKF 441

Mouse   448 ALINMKVALVRVLQNFTVQPCKETE-IPLK--LSKQGLLQPENPLLLKVVSRDE 498
            |::.:|.:|..:|:::...|.|:.: .||.  ::|.|     |.:.|:::.|||
  Fly   442 AMLELKTSLAMLLRSYRFLPDKDHQPKPLAELVTKSG-----NGIRLRILPRDE 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp3a13NP_031845.1 p450 39..491 CDD:365848 132/499 (26%)
Cyp4s3NP_573003.2 p450 35..469 CDD:278495 127/481 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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