DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp3a11 and Cyp4d2

DIOPT Version :9

Sequence 1:NP_031844.1 Gene:Cyp3a11 / 13112 MGIID:88609 Length:504 Species:Mus musculus
Sequence 2:NP_001284806.1 Gene:Cyp4d2 / 31192 FlyBaseID:FBgn0011576 Length:501 Species:Drosophila melanogaster


Alignment Length:539 Identity:148/539 - (27%)
Similarity:264/539 - (48%) Gaps:109/539 - (20%)


- Green bases have known domain annotations that are detailed below.


Mouse    13 VLLAISLVLLYRYGTRKHELFKKQG---IPGPKPLPFLGTVLNYYKGL-----WKFDMECYKKYG 69
            :|:|.:.:||:.:      |::::|   :|||:||||||.:| .|:||     ..|..:..:|||
  Fly     9 LLVAFATLLLWDF------LWRRRGNGILPGPRPLPFLGNLL-MYRGLDPEQIMDFVKKNQRKYG 66

Mouse    70 ---KTWGLFDGQTPLLAV--TDPETI-----------KNVLVK--ECFSVFTNRRDFGPVGIMSK 116
               :.|.|..     |||  |||..|           ||.|.|  .|:              :..
  Fly    67 RLYRVWILHQ-----LAVFSTDPRDIEFVLSSQQHITKNNLYKLLNCW--------------LGD 112

Mouse   117 AISISKDDEWKRYRALLSPTFTSGKLKEMFPVIEQYGDILVKYLRQKAKKGKPVTMKDVLGAYSM 181
            .:.:|...:|...|.:::|||....|::...:.:|...::|:.|:.:|....|:.:..|:...::
  Fly   113 GLLMSTGRKWHGRRKIITPTFHFKILEQFVEIFDQQSAVMVEQLQSRADGMTPINIFPVICLTAL 177

Mouse   182 DVITSTSFGVNVDSLNNPEDPFVEKA--------KKLL----RFDFFDPLLFSVVLFPFLTPVY- 233
            |:|..|:.|..:::..||..|:|:..        |:.:    |.|:         :|....|.. 
  Fly   178 DIIAETAMGTKINAQKNPNLPYVQAVNDVTNILIKRFIHAWQRVDW---------IFRLTQPTEA 233

Mouse   234 ----EMLNICM-FPKDSI-EFFKKFVDRMKESRLDSK-----QKHRVDFLQLMMNSHNNSKDKVS 287
                :.:.:.. |.::.| |..:..|:..||:..:.:     ||.|:..|.:::.|      .:.
  Fly   234 KRQDKAIKVMHDFTENIIRERRETLVNNSKETTPEEEVNFLGQKRRMALLDVLLQS------TID 292

Mouse   288 HKALSDMEITAQSIIFIFAGYETTSSTLSFTLHSLATHPDIQKKLQDEIDEAL--PNKAPPTYDT 350
            ...|||.:|..:...|:|.|::||:|.:||.|:.::.||::|::||.||.:.|  ..|:|.|...
  Fly   293 GAPLSDEDIREEVDTFMFEGHDTTTSAISFCLYEISRHPEVQQRLQQEIRDVLGEDRKSPVTLRD 357

Mouse   351 VMEMEYLDMVLNETLRLYPIANRLERVCKKDVELNGVYIPKGSTVMIPSYALHHDPQHWSEPEEF 415
            :.|:::::.|:.|:|||:|....:.|...:|||:.|.:||.|:...:..:.|..||:::..|:||
  Fly   358 LGELKFMENVIKESLRLHPPVPMIGRWFAEDVEIRGKHIPAGTNFTMGIFVLLRDPEYFESPDEF 422

Mouse   416 QPERFSKENKGSIDPYVYLPFGNGPRNCLGMRFALMNMKLALTKIMQNFSFQPCKETQIPLKLSR 480
            :||||..: ...|.||.|:||..|||||:|.:||::.||..::|::::|...|            
  Fly   423 RPERFDAD-VPQIHPYAYIPFSAGPRNCIGQKFAMLEMKSTVSKLLRHFELLP------------ 474

Mouse   481 QGLLQPEKPIVLKVVPRDA 499
               |.||....:.:|.|.|
  Fly   475 ---LGPEPRHSMNIVLRSA 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp3a11NP_031844.1 p450 39..494 CDD:278495 139/503 (28%)
Cyp4d2NP_001284806.1 p450 32..495 CDD:278495 142/510 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100014
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.