DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp2f2 and spo

DIOPT Version :9

Sequence 1:NP_031843.2 Gene:Cyp2f2 / 13107 MGIID:88608 Length:491 Species:Mus musculus
Sequence 2:NP_001286943.1 Gene:spo / 38631 FlyBaseID:FBgn0003486 Length:543 Species:Drosophila melanogaster


Alignment Length:546 Identity:141/546 - (25%)
Similarity:238/546 - (43%) Gaps:106/546 - (19%)


- Green bases have known domain annotations that are detailed below.


Mouse     7 AILLLLLAVISLSLTFSSRGKGQLP--------------------PGPKPLPILGNLLQL-RSQD 50
            ||||.:||...:.:.:..:.:...|                    |||:|.||:|||..| |.:|
  Fly    11 AILLSVLATSYICIIYGVKRRVLQPVKTKNSTEINHNAYQKYTQAPGPRPWPIIGNLHLLDRYRD 75

Mouse    51 L-LTSLTKLSKEYGSVFTVYLGSRPVIVLSGYQTVKEALVDKGEEFSGRG---AYPVFFNFTRGN 111
            . ....|.|:::||.::::..|....:|::..:.::|.|...|:..|||.   .|...|...|.|
  Fly    76 SPFAGFTALAQQYGDIYSLTFGHTRCLVVNNLELIREVLNQNGKVMSGRPDFIRYHKLFGGERSN 140

Mouse   112 GIAFSDGERWKIL--------------RRFSVQILRNFGMGKRSIEERILEEGSFLLEVLRKMEG 162
            .:|..|   |..|              |.||...::...:|...:|....|.|:.|      :.|
  Fly   141 SLALCD---WSQLQQKRRNLARRHCSPREFSCFYMKMSQIGCEEMEHWNRELGNQL------VPG 196

Mouse   163 KPFDPVFILSRSVSNIICSVVFGSRFDYDDERLLTIIHF-------INDNFKIMSSPWGEMYNIF 220
            :|.:...::.::.:|:....:...||||||.....|:.:       ||....:...||  :|..:
  Fly   197 EPINIKPLILKACANMFSQYMCSLRFDYDDVDFQQIVQYFDEIFWEINQGHPLDFLPW--LYPFY 259

Mouse   221 P----SVLDWIPGPHKRLFRNFGGMKDLIARSVREHQDSLDPNSP-RDFIDCFLTKMAQEKQDPL 280
            .    .:::|     ....|.|     ::.|.:|..:.|:|.:.| |||.|..|..:.::|.   
  Fly   260 QRHLNKIINW-----SSTIRGF-----IMERIIRHRELSVDLDEPDRDFTDALLKSLLEDKD--- 311

Mouse   281 SHFNMDTLLMTTHNLLFGGTETVGTTLRHAFLILMKYPKVQARVQEEIDRVV-GRSRMPTLEDRT 344
              .:.:|::....:.: ||...||..:......:.|...:..|:|||||.:: ..:|...|.|..
  Fly   312 --VSRNTIIFMLEDFI-GGHSAVGNLVMLVLAYIAKNVDIGRRIQEEIDAIIEEENRSINLLDMN 373

Mouse   345 SMPYTDAVIHEVQRFADVIPMNLPHRVTRDTPFRGFLIPKGTDVITLLNTVHYDSDQF-KTPQEF 408
            :||||.|.|.||.|::. .|: :||..|.||...|:.:.||| ::.:.|.|...|::| ..|:||
  Fly   374 AMPYTMATIFEVLRYSS-SPI-VPHVATEDTVISGYGVTKGT-IVFINNYVLNTSEKFWVNPKEF 435

Mouse   409 NPEHFLD-------------------DNHSF---KKSPAFMPFSAGRRLCLGEPLARMELFIYFT 451
            ||..||:                   ||...   :..|.|:|||.|:|.|:|:.|.|...|:...
  Fly   436 NPLRFLEPSKEQSPKNSKGSDSGIESDNEKLQLKRNIPHFLPFSIGKRTCIGQNLVRGFGFLVVV 500

Mouse   452 SILQNFTLQPLVDPEDIDLTPLSSGL 477
            :::|.:.:.. .:|..|.::|.|..|
  Fly   501 NVMQRYNISS-HNPSTIKISPESLAL 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp2f2NP_031843.2 p450 31..488 CDD:278495 135/522 (26%)
spoNP_001286943.1 p450 56..540 CDD:299894 134/501 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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