DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp2d10 and spo

DIOPT Version :9

Sequence 1:NP_034135.2 Gene:Cyp2d10 / 13101 MGIID:88602 Length:504 Species:Mus musculus
Sequence 2:NP_001286943.1 Gene:spo / 38631 FlyBaseID:FBgn0003486 Length:543 Species:Drosophila melanogaster


Alignment Length:558 Identity:137/558 - (24%)
Similarity:238/558 - (42%) Gaps:108/558 - (19%)


- Green bases have known domain annotations that are detailed below.


Mouse    14 IFTVIFILL---------------------------VDLMHR-HQRWTSRYPPGPVPWPVLGNLL 50
            |:|::.|||                           .::.|. :|::|.  .|||.|||::|||.
  Fly     6 IYTILAILLSVLATSYICIIYGVKRRVLQPVKTKNSTEINHNAYQKYTQ--APGPRPWPIIGNLH 68

Mouse    51 QVD-LDNMPYSLY-KLQNRYGDVFSLQMGWKPMVVINGLKAMKEVLLTCGEDTADRPQVPIFEYL 113
            .:| ..:.|::.: .|..:|||::||..|....:|:|.|:.::|||...|:..:.||....:..|
  Fly    69 LLDRYRDSPFAGFTALAQQYGDIYSLTFGHTRCLVVNNLELIREVLNQNGKVMSGRPDFIRYHKL 133

Mouse   114 GVKPGSQGVVLAPYGPEWRE--------------QRRFSVSTLRNFGLGKKSLEDWVTKEARHLC 164
            .....|..:.|.    :|.:              .|.||...::...:|.:.:|.|..:....|.
  Fly   134 FGGERSNSLALC----DWSQLQQKRRNLARRHCSPREFSCFYMKMSQIGCEEMEHWNRELGNQLV 194

Mouse   165 DAFTAQAGQPINPNTMLNNAVCNVIASLIFARRFEYEDPYLIRMQKVLEDSLTEISGLIPEVLNM 229
                  .|:|||...::..|..|:.:..:.:.||:|:|....::.:..::...||:...|  |:.
  Fly   195 ------PGEPINIKPLILKACANMFSQYMCSLRFDYDDVDFQQIVQYFDEIFWEINQGHP--LDF 251

Mouse   230 FPILLRIPGLP------GKVFQGQKSLLA-IVENLLTENRNTWDPDQPPRNLTDAFLAEIEKVKG 287
            .|.|     .|      .|:.....::.. |:|.::.....:.|.|:|.|:.|||.|      |.
  Fly   252 LPWL-----YPFYQRHLNKIINWSSTIRGFIMERIIRHRELSVDLDEPDRDFTDALL------KS 305

Mouse   288 NAESSFNDENLRMVVLDLFTAGMVTTSTTLSWALLLMILHPDVQRRVQQEIDAVIGQV-RHPEMA 351
            ..|......|..:.:|:.|..|.......:...|..:..:.|:.||:|:||||:|.:. |...:.
  Fly   306 LLEDKDVSRNTIIFMLEDFIGGHSAVGNLVMLVLAYIAKNVDIGRRIQEEIDAIIEEENRSINLL 370

Mouse   352 DQARMPYTNAVIHEVQRFGDIAPLNLPRITSRDIEVQDFLIPKGSILIPNMSSVLKDETVWEKPL 416
            |...||||.|.|.||.|:.. :|: :|.:.:.|..:..:.:.||:|:..|...:...|..|..|.
  Fly   371 DMNAMPYTMATIFEVLRYSS-SPI-VPHVATEDTVISGYGVTKGTIVFINNYVLNTSEKFWVNPK 433

Mouse   417 RFHPEHFLD---------AQGHFVKPEA-------------FMPFSAGRRSCLGEPLARMELFLF 459
            .|:|..||:         ::|.....|:             |:|||.|:|:|:|:.|.|...||.
  Fly   434 EFNPLRFLEPSKEQSPKNSKGSDSGIESDNEKLQLKRNIPHFLPFSIGKRTCIGQNLVRGFGFLV 498

Mouse   460 FTCLLQHFSFSVPNGQP---RPRNLGV----FPFPVAP 490
            ...::|.::.|..|...   .|.:|.:    ||..:.|
  Fly   499 VVNVMQRYNISSHNPSTIKISPESLALPADCFPLVLTP 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp2d10NP_034135.2 p450 37..496 CDD:278495 129/507 (25%)
spoNP_001286943.1 p450 56..540 CDD:299894 129/506 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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