DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp2c40 and spo

DIOPT Version :9

Sequence 1:NP_034134.3 Gene:Cyp2c40 / 13099 MGIID:1306815 Length:491 Species:Mus musculus
Sequence 2:NP_001286943.1 Gene:spo / 38631 FlyBaseID:FBgn0003486 Length:543 Species:Drosophila melanogaster


Alignment Length:502 Identity:142/502 - (28%)
Similarity:224/502 - (44%) Gaps:96/502 - (19%)


- Green bases have known domain annotations that are detailed below.


Mouse    31 PGPTPLPIIGNYHLID-MKD---IGQCLTNFSKTYGPVFTLYFGSQPIVVLHGYEAIKEALIDHG 91
            |||.|.|||||.||:| .:|   .|  .|..::.||.:::|.||....:|::..|.|:|.|..:|
  Fly    56 PGPRPWPIIGNLHLLDRYRDSPFAG--FTALAQQYGDIYSLTFGHTRCLVVNNLELIREVLNQNG 118

Mouse    92 EEFSGRGRIPVFDKVSTGKGIGFSHGNV-----WK--------------ATRVFTVNTLRNLGMG 137
            :..|||.     |.:...|..|....|.     |.              :.|.|:...::...:|
  Fly   119 KVMSGRP-----DFIRYHKLFGGERSNSLALCDWSQLQQKRRNLARRHCSPREFSCFYMKMSQIG 178

Mouse   138 KRTIENKVQEEAQWLMKELKKTNGSPCD--PQFIIGCAPCNVICSIVFQNRFDYKDKDFLSLIGK 200
            ...:|:..:|....|:.      |.|.:  |..:..||  |:....:...||||.|.||..::..
  Fly   179 CEEMEHWNRELGNQLVP------GEPINIKPLILKACA--NMFSQYMCSLRFDYDDVDFQQIVQY 235

Mouse   201 VNECTEILSSPGCQIF---------NAVPILIDYCPGSHNKLFKNHTWIKSYLLGKIKEHEE-SL 255
            .:|           ||         :.:|.|..:.....||:....:.|:.:::.:|..|.| |:
  Fly   236 FDE-----------IFWEINQGHPLDFLPWLYPFYQRHLNKIINWSSTIRGFIMERIIRHRELSV 289

Mouse   256 DVTNP-RDFIDYFLIQRRQKNGIEHMDYTIEHLATLVTDLVFGGTETLSSTMRFALLLLMKHTHI 319
            |:..| |||.|..|     |:.:|..|.:...:..::.|.: ||...:.:.:...|..:.|:..|
  Fly   290 DLDEPDRDFTDALL-----KSLLEDKDVSRNTIIFMLEDFI-GGHSAVGNLVMLVLAYIAKNVDI 348

Mouse   320 TAKVQEEIDNVI-GRHRSPCMQDRNHMPYTNAMVHEVQRYIDLGPNGVVHEVTCDTKFRNYFIPK 383
            ..::|||||.:| ..:||..:.|.|.||||.|.:.||.|| ...|. |.|..|.||....|.:.|
  Fly   349 GRRIQEEIDAIIEEENRSINLLDMNAMPYTMATIFEVLRY-SSSPI-VPHVATEDTVISGYGVTK 411

Mouse   384 GTQVMTSLTSVLHDSTEF-PNPEVFDPGHFLDDN-----GNFKKSD-----------------YF 425
            ||.|..: ..||:.|.:| .||:.|:|..||:.:     .|.|.||                 :|
  Fly   412 GTIVFIN-NYVLNTSEKFWVNPKEFNPLRFLEPSKEQSPKNSKGSDSGIESDNEKLQLKRNIPHF 475

Mouse   426 VPFSAGKRICVGESLARMELFLFLTTILQNFKLKPLVDPKDIDMTPK 472
            :|||.|||.|:|::|.|...||.:..::|.:.:.. .:|..|.::|:
  Fly   476 LPFSIGKRTCIGQNLVRGFGFLVVVNVMQRYNISS-HNPSTIKISPE 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp2c40NP_034134.3 p450 30..487 CDD:333810 142/502 (28%)
spoNP_001286943.1 p450 56..540 CDD:299894 142/502 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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