DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp2c39 and Cyp303a1

DIOPT Version :9

Sequence 1:NP_001360866.1 Gene:Cyp2c39 / 13098 MGIID:1306818 Length:490 Species:Mus musculus
Sequence 2:NP_001285977.1 Gene:Cyp303a1 / 49165 FlyBaseID:FBgn0001992 Length:503 Species:Drosophila melanogaster


Alignment Length:508 Identity:136/508 - (26%)
Similarity:256/508 - (50%) Gaps:32/508 - (6%)


- Green bases have known domain annotations that are detailed below.


Mouse     5 TFLVLTLSSLILLLLWRQRSGRGRLPPGPTPFPIIGNFLQIDGKN-----FSQSLTNFSKAYGPV 64
            |.:.:..::|:.:|....|..: |.||||..:||:|:.||:....     |.:.:..|::.|...
  Fly     4 TVIWIFCATLLAILFGGVRKPK-RFPPGPAWYPIVGSALQVSQLRCRLGMFCKVIDVFARQYVNP 67

Mouse    65 FTLY---LGSRPTVVLHGYEAVKEALIDHGEEFSDRGSIPMVEKINNGLGIVFSNGNRWKEIRRF 126
            :..|   :|....|:.:..:|:.|.:.:...:....|....:...|:.||::.::|..|.|.|||
  Fly    68 YGFYGLKIGKDKVVIAYTNDAISEMMTNEDIDGRPDGIFYRLRTFNSRLGVLLTDGEMWVEQRRF 132

Mouse   127 TLTTLRNLGMGKRNIEDRVQEEAQCLVEELRKT------KGSPCDPTFILSCAPCNVICSIIFQD 185
            .|..|:|.|..:..:.|.|..||.||:::|:..      |.:..:...:.|....|.:..::...
  Fly   133 ILRHLKNFGFARSGMMDIVHNEATCLLQDLKDKVLKSGGKQTRIEMHDLTSVYVLNTLWCMLSGR 197

Mouse   186 RFDYKDKDFLMLME---KLNENVKILSSPWLQVCNNFPLLIDYCP--GSHHKVLKNVKYIRSYLL 245
            |::....:...|:|   :|.:|:.::.:    :.::||||....|  ..::..:::.:.:.:::.
  Fly   198 RYEPGSPEITQLLETFFELFKNIDMVGA----LFSHFPLLRFIAPNFSGYNGFVESHRSLYTFMS 258

Mouse   246 EKIKEHQESL-DVTNPRDFIDYYLIKQKQANHIQQAEFSLENLACTINNLFAAGTETTSTTLRYA 309
            ::|:.|:.:. :...|||.:|.||..|.:.|. ::..||.::|.....::|.||:|||:.:|.:.
  Fly   259 KEIELHRLTYKNYDEPRDLMDSYLRAQDEGND-EKGMFSDQSLLAICLDMFLAGSETTNKSLGFC 322

Mouse   310 LLLLMKYPDVTAKVQEEIDHVIGRHRSP-CMQDRNHMPYTDAMIHEVQRFINLVPNNIPRAVTCD 373
            .:.|:..|::..:..:||..|:|..|.| ..:||..:||.:|:..|..|...|....||....||
  Fly   323 FMHLVLQPEIQERAFQEIKEVVGLERIPEWSRDRTKLPYCEAITLEAVRMFMLHTFGIPHRAVCD 387

Mouse   374 IKFRNYLIPKGTTVVTSLTSVLHDSKEFPNPELFDPGHFLDANGNFKKSDHFMPFSAGKRVCAGE 438
            .:...|.|||.|.|:.....:|.:..:||:||.|:|..:| .:|:.|..:.|.||..|:..|.|:
  Fly   388 TRLSGYEIPKDTMVIACFRGMLINPVDFPDPESFNPDRYL-FDGHLKLPEAFNPFGFGRHRCMGD 451

Mouse   439 GLARMELFLFLTTILQNFKLKSLVHPKDI-DMIPFVNGLIALPPHYQVCIIPR 490
            .|.|..||:|.||:|||||:.::  |..: :.:|......|:.| |.:.::.|
  Fly   452 LLGRQNLFMFTTTVLQNFKMVAI--PGQVPEEVPLEGATAAVKP-YDIMLVAR 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp2c39NP_001360866.1 p450 30..487 CDD:365848 130/478 (27%)
Cyp303a1NP_001285977.1 p450 28..480 CDD:278495 126/459 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000008
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

Return to query results.
Submit another query.