DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp2a12 and spo

DIOPT Version :9

Sequence 1:NP_598418.1 Gene:Cyp2a12 / 13085 MGIID:105055 Length:492 Species:Mus musculus
Sequence 2:NP_001286943.1 Gene:spo / 38631 FlyBaseID:FBgn0003486 Length:543 Species:Drosophila melanogaster


Alignment Length:516 Identity:138/516 - (26%)
Similarity:234/516 - (45%) Gaps:85/516 - (16%)


- Green bases have known domain annotations that are detailed below.


Mouse     7 LLLAILAFLSVMVLVSVWQ---QKIRGK--------------LPPGPIPLPFIGN--YLQLNRKD 52
            :||::||...:.::..|.:   |.::.|              ..|||.|.|.|||  .|...|..
  Fly    12 ILLSVLATSYICIIYGVKRRVLQPVKTKNSTEINHNAYQKYTQAPGPRPWPIIGNLHLLDRYRDS 76

Mouse    53 VYSSITQLQEHYGPVFTIHLGPRRVVVLYGYDAVKEALVDHAEEFSGRGEQATFNTLFKG---YG 114
            .::..|.|.:.||.::::..|..|.:|:...:.::|.|..:.:..|||.:...::.||.|   ..
  Fly    77 PFAGFTALAQQYGDIYSLTFGHTRCLVVNNLELIREVLNQNGKVMSGRPDFIRYHKLFGGERSNS 141

Mouse   115 VAFSNGERAKQLRRFSIATLRDFGMGKRGVEERIQEEAGCL-IKMLQGTC--------------- 163
            :|..:..:.:|.||         .:.:|....|   |..|. :||.|..|               
  Fly   142 LALCDWSQLQQKRR---------NLARRHCSPR---EFSCFYMKMSQIGCEEMEHWNRELGNQLV 194

Mouse   164 -GAPIDPTIYLSKTASNVISSIVFGDRFNYEDKEFLSLLQMMGQVNKFAASPTGQLYDMFHSVMK 227
             |.||:....:.|..:|:.|..:...||:|:|.:|..::|...::  |.....|...|....:..
  Fly   195 PGEPINIKPLILKACANMFSQYMCSLRFDYDDVDFQQIVQYFDEI--FWEINQGHPLDFLPWLYP 257

Mouse   228 YLPGPQQQIIKDSHKLEDFMIQK-VKQNQSTLDPNSP-RDFIDSFLIHMQKEKYVNSEFHMKNLV 290
            :......:||..|..:..|:::: ::..:.::|.:.| |||.|:.|..:.::|.|:     :|.:
  Fly   258 FYQRHLNKIINWSSTIRGFIMERIIRHRELSVDLDEPDRDFTDALLKSLLEDKDVS-----RNTI 317

Mouse   291 MTSLNLFFAGSETVSSTLRYGFLLLMKHPDVEAKVHEEIDRVI-GRNRQPQYEDHMKMPYTQAVI 354
            :..|..|..|...|.:.:......:.|:.|:..::.||||.:| ..||.....|...||||.|.|
  Fly   318 IFMLEDFIGGHSAVGNLVMLVLAYIAKNVDIGRRIQEEIDAIIEEENRSINLLDMNAMPYTMATI 382

Mouse   355 NEIQRFSNFAPLGIPRRITKDTSFRGFFLPKGTEVFPILGSLMTDPKFFSSPKDFNPQHFLD--- 416
            .|:.|:|: :|: :|...|:||...|:.:.|||.||.....|.|..||:.:||:|||..||:   
  Fly   383 FEVLRYSS-SPI-VPHVATEDTVISGYGVTKGTIVFINNYVLNTSEKFWVNPKEFNPLRFLEPSK 445

Mouse   417 ------------------DKGQLKK-IPAFLPFSTGKRFCLGDSLAKMELFLFFTTILQNF 458
                              :|.|||: ||.|||||.|||.|:|.:|.:...||....::|.:
  Fly   446 EQSPKNSKGSDSGIESDNEKLQLKRNIPHFLPFSIGKRTCIGQNLVRGFGFLVVVNVMQRY 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp2a12NP_598418.1 p450 33..489 CDD:278495 131/473 (28%)
spoNP_001286943.1 p450 56..540 CDD:299894 131/472 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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