DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43355 and Prb1

DIOPT Version :10

Sequence 1:NP_001245986.1 Gene:CG43355 / 13084068 FlyBaseID:FBgn0263087 Length:170 Species:Drosophila melanogaster
Sequence 2:NP_001382552.1 Gene:Prb1 / 257652 RGDID:628796 Length:207 Species:Rattus norvegicus


Alignment Length:168 Identity:55/168 - (32%)
Similarity:61/168 - (36%) Gaps:41/168 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 GHHPHGGPPPPRHHHHHRGRHGAGGRCGHGHQ-HQPFPPPPH-----RP---HRHGSHFWEGYGP 65
            |.| |..|||....:........|...|.|.. ::|..||||     ||   |.||         
  Rat    43 GQH-HQKPPPASDENGDGDDSDDGDDDGSGDDGNRPERPPPHGGNHQRPPPGHHHG--------- 97

  Fly    66 PPPP-----------PHYPPPGGYLYGGHHWQGYPPPPPPPPSSHHPPPSGSPAGGCPHCGCPGG 119
            |||.           |..|||          ||.|..||.|.:...|||.|.|....|..|.|.|
  Rat    98 PPPSGGPQTSSQPGNPQGPPP----------QGGPQGPPQPGNPQGPPPQGGPQQRPPQPGKPQG 152

  Fly   120 GPPQSGFPGTERPHNETSNDDQHGSFQSPIPGGEVPTD 157
            .|||.|..|..:|.|......|.|..|.|...|: |.|
  Rat   153 PPPQGGPQGPPQPGNPQGPPPQGGHQQRPPQPGK-PQD 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43355NP_001245986.1 None
Prb1NP_001382552.1 6 X 18 AA approximate tandem repeats 80..189 44/128 (34%)

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