DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp26a1 and Cyp4p2

DIOPT Version :10

Sequence 1:NP_031837.2 Gene:Cyp26a1 / 13082 MGIID:1096359 Length:497 Species:Mus musculus
Sequence 2:NP_610472.1 Gene:Cyp4p2 / 35946 FlyBaseID:FBgn0033395 Length:520 Species:Drosophila melanogaster


Alignment Length:472 Identity:106/472 - (22%)
Similarity:187/472 - (39%) Gaps:58/472 - (12%)


- Green bases have known domain annotations that are detailed below.


Mouse    51 FPFFGETLQMVLQRRKFLQMKRRKYGFIYKTHLFGRPTVRVMGADNVRRILLGEHRLVSVHWPAS 115
            |...|:....|...   |:...:..|..|..:..|.....|:.|.|...||...:.:........
  Fly    61 FDLLGKDTDQVFTH---LRQLAKNSGDSYLQYSMGFSNFNVIDAHNAANILNHPNLITKGVIYNF 122

Mouse   116 VRTILGAGCLSNLHDSSHKQRKKVIMQAFSREALQCYVPVIAEEVSSCLEQWLSCGERGLLVYPE 180
            :...|..|.|:......| .|:.::.:.|..:.|..:..:...|....:.|:....|..:.:...
  Fly   123 LHPFLRTGVLTATEKKWH-TRRSMLTRTFHLDILNQFQEIFIAESLKFVSQFQGQNEVVVSLKDR 186

Mouse   181 VKRLMFRIAMRILLGCEPGPAGGGEDEQQ----LVEAFEEMTRNLFSLPI--DVPFSGLYRGVK- 238
            :.|..........:|.:........|..:    :::  |.:||.:.: |:  |.....::.|.| 
  Fly   187 ISRFTLNSICETAMGIKLDEMAEKGDRYRANFHIID--EGLTRRIVN-PLYWDDCVYNMFTGHKY 248

Mouse   239 ----------ARNLIHAR---IEENIRAKIRRLQATEPDGGCK------DALQLLIEHSWERGER 284
                      :|.:|..|   :||.:  :.||...|..|..|.      ..|..||  ..|:...
  Fly   249 NAALKVVHEFSREIIAKRRVLLEEEL--ENRRATQTADDDICVIRKKRFAMLDTLI--CAEKDGL 309

Mouse   285 LDMQALKQSSTELLFGGHETTASAATSLITYLGLYPHVLQKVREEIKSKGLLCKSNQDNKLDMET 349
            :|...:.:....|:..|::||:......:..:.||....:...:||:...|...||    |::..
  Fly   310 IDDIGISEEVDTLMAEGYDTTSIGLVFGLMNMSLYAAEQELCYQEIQEHILDDLSN----LNLSQ 370

Mouse   350 LEQLKYTGCVIKETLRLNPPVPGGFRVALKTFEL-NGYQIPKGWNVIYSICDTHDVADIFTNKEE 413
            |.:|.|.|..||||:||.|.:|...|..|:..|| ||..:||...:...:.|.|.....:.:.||
  Fly   371 LSKLNYLGYFIKETMRLYPSIPIMGRQTLQETELENGLILPKRSQINIHVFDIHRNPKYWESPEE 435

Mouse   414 FNPDRFIVP-----HPEDASRFSFIPFGGGLRSCVGKEFAKILLKIFTVELARHCDWQLLNGPPT 473
            |.|:||:..     ||     :::|||..|.|:|:|:::|...:|...|.:.:|  :::|   |.
  Fly   436 FRPERFLPQNCLKRHP-----YAYIPFSAGQRNCIGQKYAMQEMKTLMVVILKH--FKIL---PV 490

Mouse   474 MKTSPTVYPVDNLPARF 490
            :.....|:.| .:..||
  Fly   491 IDPKSIVFQV-GITLRF 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp26a1NP_031837.2 CYP26A1 55..490 CDD:410731 103/466 (22%)
Cyp4p2NP_610472.1 CYP4 83..512 CDD:410721 102/447 (23%)

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