DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp26a1 and Cyp4ac2

DIOPT Version :9

Sequence 1:NP_031837.2 Gene:Cyp26a1 / 13082 MGIID:1096359 Length:497 Species:Mus musculus
Sequence 2:NP_608917.3 Gene:Cyp4ac2 / 33755 FlyBaseID:FBgn0031694 Length:511 Species:Drosophila melanogaster


Alignment Length:530 Identity:118/530 - (22%)
Similarity:190/530 - (35%) Gaps:142/530 - (26%)


- Green bases have known domain annotations that are detailed below.


Mouse    14 FVLPLLLFLAALKLW--------------------------DLYCVSSRDRSCALPLPPGTMGFP 52
            |..||::|:.. |||                          .:|...|:.|              
  Fly     7 FAAPLVIFIFR-KLWAHLNRTYFILSLCKRIRTEDGSLLESKIYVAPSKTR-------------- 56

Mouse    53 FFGETLQMV---------LQRRKFLQMKRRKYGFIYKTHLFGRPTVRVMGADNVRRILLGEHRLV 108
             ||....:|         ..|....:.|.|.|.:    :.|..|...::.|:....||.....:.
  Fly    57 -FGNNFDLVNFTSESIFNFMRDASAKAKGRNYLW----YFFHAPMYNIVRAEEAEEILQSSKLIT 116

Mouse   109 SVHWPASVRTILGAGCLSNLHDSSHKQRKKVIMQAFSREALQCYVPVIAEEVSSCLEQWLSCGER 173
            .......::..||.|.|.:.....| .|:|.:..||..:.||.::.:..||.:..          
  Fly   117 KNMIYELLKPFLGEGLLISTDQKWH-SRRKALTPAFHFKVLQSFLIIFKEECNKL---------- 170

Mouse   174 GLLVYPEVKRLMFRIAMRILLGCEPGPAGGGEDEQQLVEAFEEMTRNLFSLPIDVPFSGLYRGVK 238
                   ||.|...:.|.:.|             .|::..|  ...|:....:.|....|..|::
  Fly   171 -------VKVLHQSVNMELEL-------------NQVIPQF--TLNNVCETALGVKLDDLSEGIR 213

Mouse   239 ARNLIHARIEE--------------------------------------NIRAKIRRL-----QA 260
            .|..||| |||                                      ||..|.|.|     ..
  Fly   214 YRQSIHA-IEEVMQQRLCNPFFYNIVYFFLFGDYRKQVNNLKIAHEFSSNIIEKRRSLFKSNQLG 277

Mouse   261 TEPDGGCKD---ALQLLIEHSWERGERLDMQALKQSSTELLFGGHETTASAATSLITYLGLYPHV 322
            .|.:.|.|.   .|..|:  :.|...::|.|.:.......:|.|::||::.....:..|.|:..|
  Fly   278 QEDEFGKKQRYAMLDTLL--AAEADGQIDHQGICDEVNTFMFEGYDTTSTCLIFTLLMLALHEDV 340

Mouse   323 LQKVREEIKSKGLLCKSNQDNKLDMETLEQLKYTGCVIKETLRLNPPVPGGFRVALKTFELNGYQ 387
            .:|..||||   .|...:.|  :.:....:|.|..|||||:|||.|.||...|..::...:||..
  Fly   341 QKKCYEEIK---YLPDDSDD--ISVFQFNELVYMECVIKESLRLFPSVPFIGRRCVEEGVVNGLI 400

Mouse   388 IPKGWNVIYSICDTHDVADIFTNKEEFNPDRFIVPHPEDASRFSFIPFGGGLRSCVGKEFAKILL 452
            :||...:...:.:....|..|:|.:.|.||||...:..:...|:|:||..|.|:|:|::||.:.:
  Fly   401 MPKNTQINIHLYEIMRDARHFSNPKMFQPDRFFPENTVNRHPFAFVPFSAGQRNCIGQKFAILEI 465

Mouse   453 KIFTVELARH 462
            |:....:.|:
  Fly   466 KVLLAAVIRN 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp26a1NP_031837.2 p450 43..491 CDD:299894 108/475 (23%)
Cyp4ac2NP_608917.3 p450 57..505 CDD:278495 108/464 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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