DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp26a1 and Cyp4ac1

DIOPT Version :10

Sequence 1:NP_031837.2 Gene:Cyp26a1 / 13082 MGIID:1096359 Length:497 Species:Mus musculus
Sequence 2:NP_608916.1 Gene:Cyp4ac1 / 33754 FlyBaseID:FBgn0031693 Length:509 Species:Drosophila melanogaster


Alignment Length:503 Identity:121/503 - (24%)
Similarity:217/503 - (43%) Gaps:75/503 - (14%)


- Green bases have known domain annotations that are detailed below.


Mouse     1 MGLPALLASALCTFVLPLLL-------FLAALKLWDLYCVSSRDRS---CALPLPPGTMGFPFFG 55
            :|:|.|||      ||.|||       |:.:|    ...|.:.|.|   ..:.:.||...   ||
  Fly     6 LGIPILLA------VLTLLLKHINKTYFILSL----TKRVRTEDGSPLESKVAIMPGKTR---FG 57

Mouse    56 ETLQMV---------LQRRKFLQMKRRKY--GFIYKTHLFGRPTVRVMGADNVRRILLGEHRLVS 109
            ..|.::         ..|....:.|.:.|  .|:|      .|...|:..:....:......:..
  Fly    58 NNLDILNFTPASVFNFVRESTAKAKGQNYLWYFLY------APMYNVVRPEEAEEVFQSTKLITK 116

Mouse   110 VHWPASVRTILGAGCLSNLHDSSHK--QRKKVIMQAFSREALQCYVPVIAEEVSSCLEQWLSCGE 172
            ......:|..||.|.|.:   :.||  .|:|.:..||....||.::.:..||   | :::|:..|
  Fly   117 NVVYELIRPFLGDGLLIS---TDHKWHSRRKALTPAFHFNVLQSFLGIFKEE---C-KKFLNVLE 174

Mouse   173 RGLLVYPEVKRLMFRIAMRIL----LGCEPGPAGGGEDEQQLVEAFEEMTRNLFSLPIDVPFS-- 231
            :.|....|:.:::....:..:    ||.:......|.:.::.:.|.||:.......|: :.::  
  Fly   175 KNLDAELELNQVIPPFTLNNICETALGVKLDDMSEGNEYRKAIHAIEEVLIQRVCNPL-MYYNWY 238

Mouse   232 ----GLYR-GVKARNLIH---ARIEENIRAKIRRLQATEPDG-GCKD---ALQLLIEHSWERGER 284
                |.|| .::...::|   :||.|..|.:.::.|..|.|. |.|.   .|..|:  :.|...:
  Fly   239 FFVYGDYRKHLQNLRIVHDFSSRIIERKRQQFQQKQLGEVDEFGRKQRYAMLDTLL--AAEADGQ 301

Mouse   285 LDMQALKQSSTELLFGGHETTASAATSLITYLGLYPHVLQKVREEIKSKGLLCKSNQDNKLDMET 349
            :|.|.:.......:|.|::||::.....:..|.|:..|.:|..||:::   |.:.:.|  :.|..
  Fly   302 IDHQGICDEVNTFMFEGYDTTSTCLIFTLLMLALHEDVQKKCYEEVEN---LPEDSDD--ISMFQ 361

Mouse   350 LEQLKYTGCVIKETLRLNPPVPGGFRVALKTFELNGYQIPKGWNVIYSICDTHDVADIFTNKEEF 414
            ..:|.|..|||||:||:.|.||...|..::...:||..:||...:...|.|.......|...:.|
  Fly   362 FNKLVYLECVIKESLRMFPSVPFIGRQCVEETVVNGMVMPKDTQISIHIYDIMRDPRHFPKPDLF 426

Mouse   415 NPDRFIVPHPEDASRFSFIPFGGGLRSCVGKEFAKILLKIFTVELARH 462
            .||||:..:..:...|:::||..|.|:|:|::||.:.:|:....:.|:
  Fly   427 QPDRFLPENTVNRHPFAYVPFSAGQRNCIGQKFAILEMKVLLAAVIRN 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp26a1NP_031837.2 CYP26A1 55..490 CDD:410731 103/439 (23%)
Cyp4ac1NP_608916.1 CYP4 83..502 CDD:410721 99/413 (24%)

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