DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp26a1 and Cyp311a1

DIOPT Version :9

Sequence 1:NP_031837.2 Gene:Cyp26a1 / 13082 MGIID:1096359 Length:497 Species:Mus musculus
Sequence 2:NP_572780.3 Gene:Cyp311a1 / 32170 FlyBaseID:FBgn0030367 Length:483 Species:Drosophila melanogaster


Alignment Length:506 Identity:121/506 - (23%)
Similarity:216/506 - (42%) Gaps:87/506 - (17%)


- Green bases have known domain annotations that are detailed below.


Mouse    17 PLLLFLAAL----KLWDLYCVSSRDRSCALPLPPGTMGFPFFGETLQMVLQRRK------FLQMK 71
            ||||....:    :.|.|..:.|.        .||...||..|.. |||.:.|.      |.:: 
  Fly     5 PLLLITLTIWILVRKWTLLRLGSS--------LPGPWAFPLLGNA-QMVGKLRPEYIFLVFTEL- 59

Mouse    72 RRKYGFIYKTHLFGRPTVRVMGADNVRRILLGEHRLVSVHWPA--------SVRTILGAGCLSNL 128
            |.::|..|:..|..:..|.:..|:..|:.|         |.|.        .:..::|.|.|.: 
  Fly    60 RDRFGATYRLRLGPQLWVFLHSAEETRQAL---------HDPTLRKADTFMQLEPLIGNGLLIS- 114

Mouse   129 HDSSHKQRKKVIMQAFSREALQCYVPVIAEEVSSCLEQWLSCGERGLL--VYPEVKRLMFRIAMR 191
            |.:...::::::..||..:.|:.:.|.|...|...:      |..|..  .:.||...:|...:.
  Fly   115 HGAHWTRQRRLLTPAFQPQLLRSFAPAIGGHVERLV------GRLGATRGAFLEVTEPLFACLLD 173

Mouse   192 ILLGCEPGPAGGGE--DEQQLVEAFEEMTRNLFSLPIDVPFSG--------LYRGVKAR-NLIHA 245
            .::....|.....:  |...:::||...::.||...|:...|.        |:|.:..: .:||:
  Fly   174 AIVDTSMGAQLDTQSVDHSPIIQAFHLSSKLLFKRMINPLLSSDWIFQRTQLWRDLDEQLQVIHS 238

Mouse   246 RIEENIRAKIRR-LQATEPDGGCKDALQLLIEHSWERGERLDMQALKQSSTELLFGGHETTASAA 309
            ::|..|..:.:. |...||.|...:.|..|:...:| |:.|..:.::......:|.|.:||.:|.
  Fly   239 QMESVIEKRAKELLDMGEPAGRAHNLLDTLLLAKFE-GQSLSRREIRDEINTFVFAGVDTTTAAM 302

Mouse   310 TSLITYLGLYPHVLQKVREEIKSKGLLCKSNQDNKLDMETLEQLKYTGCVIKETLRLNPPVPGGF 374
            :.::..|..:|....::|:|::...|      |...|::.|..|.|...:|||.|||...||...
  Fly   303 SFVLYALAKFPETQTRLRKELQDVAL------DETTDLDALNGLPYLEALIKEVLRLYTIVPTTG 361

Mouse   375 RVALKTFELNGYQIPKG---WNVIYSICDTHDVADIFTNKEEFNPDRFIVPHPEDAS----RFSF 432
            |...::.|:.|.....|   |..:|.:  .|| .:.:.:...|.|:|::   |||.:    .||:
  Fly   362 RQTTQSTEIGGRTYCAGVTLWINMYGL--AHD-KEYYPDPYAFKPERWL---PEDGAVAPPAFSY 420

Mouse   433 IPFGGGLRSCVGKEFAKILLKIFTVELARHCDWQLLNGPPTMKTSPTVYPV 483
            |||.||...|:|:.::.:|:|:.|..|.|  ::|       |:.||...|:
  Fly   421 IPFSGGPHVCIGRRYSLLLMKLLTARLVR--EFQ-------MELSPEQAPL 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp26a1NP_031837.2 p450 43..491 CDD:299894 114/476 (24%)
Cyp311a1NP_572780.3 p450 30..480 CDD:278495 114/473 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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