DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp1b1 and spo

DIOPT Version :9

Sequence 1:NP_034124.1 Gene:Cyp1b1 / 13078 MGIID:88590 Length:543 Species:Mus musculus
Sequence 2:NP_001286943.1 Gene:spo / 38631 FlyBaseID:FBgn0003486 Length:543 Species:Drosophila melanogaster


Alignment Length:565 Identity:147/565 - (26%)
Similarity:247/565 - (43%) Gaps:114/565 - (20%)


- Green bases have known domain annotations that are detailed below.


Mouse    21 TTLLLLFSVLAAVHL------GQWLLRQWQRK-----------PWSSPPGPFPWPLIGNAAAVGQ 68
            |.|.:|.||||..::      .:.:|:..:.|           .::..|||.|||:|||.     
  Fly     8 TILAILLSVLATSYICIIYGVKRRVLQPVKTKNSTEINHNAYQKYTQAPGPRPWPIIGNL----- 67

Mouse    69 ASHLY----------FARLARRYGDVFQIRLGSCPVVVLNGESAIHQALVQQGSIFADRPPFASF 123
              ||.          |..||::|||::.:..|....:|:|....|.:.|.|.|.:.:.||.|..:
  Fly    68 --HLLDRYRDSPFAGFTALAQQYGDIYSLTFGHTRCLVVNNLELIREVLNQNGKVMSGRPDFIRY 130

Mouse   124 RVVSGG---RSLAFGHYSEHWKTQRRSA--YSTMRAFSTRHPRSRGLLEGHALAE--ARELVAVL 181
            ..:.||   .|||...:|:..:.:|..|  :.:.|.||..:.:...:  |....|  .|||    
  Fly   131 HKLFGGERSNSLALCDWSQLQQKRRNLARRHCSPREFSCFYMKMSQI--GCEEMEHWNREL---- 189

Mouse   182 VRRCAGGAFLDPTQP------VIVAVANVMSAVCFGCRYNHDDAEFLELLSHNEEFGRTVGAGSL 240
                  |..|.|.:|      ::.|.||:.|......|:::||.:|.:::.:.:|....:..|..
  Fly   190 ------GNQLVPGEPINIKPLILKACANMFSQYMCSLRFDYDDVDFQQIVQYFDEIFWEINQGHP 248

Mouse   241 VDVLPWLQLFPNPVRTTFRKFEQLNRNFSNFVLDKFLRHRESLVPGAAP-RDMTDAFILSAEKKA 304
            :|.||||..|   .:....|....:.....|::::.:||||..|....| ||.|||.:.|.    
  Fly   249 LDFLPWLYPF---YQRHLNKIINWSSTIRGFIMERIIRHRELSVDLDEPDRDFTDALLKSL---- 306

Mouse   305 SGAPGDDSSGLDLEDVPAT-----ITDIFGASQDTLSTALLWLLILFTRYPDVQARVQAELDQVV 364
                      |:.:||...     :.|..| ....:...::.:|....:..|:..|:|.|:|.::
  Fly   307 ----------LEDKDVSRNTIIFMLEDFIG-GHSAVGNLVMLVLAYIAKNVDIGRRIQEEIDAII 360

Mouse   365 GRD-RLPCMSDQPNLPYVMAFLYESMRFSSFLPVTIPHATTANTFVLGYYIPKNTVVFVNQWSVN 428
            ..: |...:.|...:||.||.::|.:|:|| .|: :||..|.:|.:.||.:.|.|:||:|.:.:|
  Fly   361 EEENRSINLLDMNAMPYTMATIFEVLRYSS-SPI-VPHVATEDTVISGYGVTKGTIVFINNYVLN 423

Mouse   429 HDPAKWPNPEDFDPARFL--------------------DKDGFINKALASSVMIFSVGKRRCIGE 473
            .....|.||::|:|.|||                    |.:....|......:.||:|||.|||:
  Fly   424 TSEKFWVNPKEFNPLRFLEPSKEQSPKNSKGSDSGIESDNEKLQLKRNIPHFLPFSIGKRTCIGQ 488

Mouse   474 ELSKMLLFLFISILAHQCNFKANQNESSNMSFSYGLTIKPKSFRI 518
            .|.:...||.:..:..:.|. ::.|.|:       :.|.|:|..:
  Fly   489 NLVRGFGFLVVVNVMQRYNI-SSHNPST-------IKISPESLAL 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp1b1NP_034124.1 p450 51..518 CDD:365848 138/516 (27%)
spoNP_001286943.1 p450 56..540 CDD:299894 138/517 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4653
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.870

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