DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp1a1 and Cyp303a1

DIOPT Version :9

Sequence 1:NP_001129531.1 Gene:Cyp1a1 / 13076 MGIID:88588 Length:524 Species:Mus musculus
Sequence 2:NP_001285977.1 Gene:Cyp303a1 / 49165 FlyBaseID:FBgn0001992 Length:503 Species:Drosophila melanogaster


Alignment Length:523 Identity:147/523 - (28%)
Similarity:227/523 - (43%) Gaps:78/523 - (14%)


- Green bases have known domain annotations that are detailed below.


Mouse    22 VFCLGFWVVRATRT-----WVPKGLKTPPGPWGLPFIGHMLTVGK-------------------- 61
            :|....|:..||..     .|.|..:.||||...|.:|..|.|.:                    
  Fly     1 MFYTVIWIFCATLLAILFGGVRKPKRFPPGPAWYPIVGSALQVSQLRCRLGMFCKVIDVFARQYV 65

Mouse    62 NPHLSLTRLSQQYGDVLQIRIGSTPVVVLSGLNTIKQALVRQGDDFKGRPDLYSFTLITNGKSMT 126
            ||:       ..||    ::||...||:....:.|.:.:.  .:|..||||...:.|.|....:.
  Fly    66 NPY-------GFYG----LKIGKDKVVIAYTNDAISEMMT--NEDIDGRPDGIFYRLRTFNSRLG 117

Mouse   127 FNPDSGPVWAARRRLAQNALKSFSIASDPTSASSCYLEEHVSKEANYLVSKLQ-KVMAEVG---H 187
            .....|.:|..:||.....||:|..|...       :.:.|..||..|:..|: ||:...|   .
  Fly   118 VLLTDGEMWVEQRRFILRHLKNFGFARSG-------MMDIVHNEATCLLQDLKDKVLKSGGKQTR 175

Mouse   188 FDPYKYLVVSVANVICAICFGQRYDHDDQELLSIVNLSNE-FGEVTGSGYPADFIPVLRYL-PN- 249
            .:.:....|.|.|.:..:..|:||:....|:..::....| |..:...|......|:||:: || 
  Fly   176 IEMHDLTSVYVLNTLWCMLSGRRYEPGSPEITQLLETFFELFKNIDMVGALFSHFPLLRFIAPNF 240

Mouse   250 SSLDAFKDLNDKFYSFMKKLIKEH---YRTFEKGHIRDITDSLIEHCQDRKLDENANVQLSDDKV 311
            |..:.|.:.:...|:||.|.|:.|   |:.:::.  ||:.||.: ..||...||..  ..||..:
  Fly   241 SGYNGFVESHRSLYTFMSKEIELHRLTYKNYDEP--RDLMDSYL-RAQDEGNDEKG--MFSDQSL 300

Mouse   312 ITIVLDLFGAGFDTVTTAISWSLMYLVTNPRVQRKIQEELDTVIGRDRQPRLS-DRPQLPYLEAF 375
            :.|.||:|.||.:|...::.:..|:||..|.:|.:..:|:..|:|.:|.|..| ||.:|||.||.
  Fly   301 LAICLDMFLAGSETTNKSLGFCFMHLVLQPEIQERAFQEIKEVVGLERIPEWSRDRTKLPYCEAI 365

Mouse   376 ILETFRHSSFVPFTIPHSTTRDTSLNGFYIPKGCCV-------FVNQWQVNHDRELWGDPNEFRP 433
            .||..|......|.|||....||.|:|:.|||...|       .:|...       :.||..|.|
  Fly   366 TLEAVRMFMLHTFGIPHRAVCDTRLSGYEIPKDTMVIACFRGMLINPVD-------FPDPESFNP 423

Mouse   434 ERFLTPSGTLDKRLSEKVTLFGLGKRKCIGETIGRSEVFLFLAILLQQIEFKVSPGEKVDMTPTY 498
            :|:|. .|.|  :|.|....||.|:.:|:|:.:||..:|:|...:||..:....||:..:..|..
  Fly   424 DRYLF-DGHL--KLPEAFNPFGFGRHRCMGDLLGRQNLFMFTTTVLQNFKMVAIPGQVPEEVPLE 485

Mouse   499 GLT 501
            |.|
  Fly   486 GAT 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp1a1NP_001129531.1 Mitochondrial targeting signal. /evidence=ECO:0000250|UniProtKB:P00185 33..44 3/15 (20%)
p450 44..503 CDD:365848 141/496 (28%)
Cyp303a1NP_001285977.1 p450 28..480 CDD:278495 138/486 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45226
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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