DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cybb and Duox

DIOPT Version :9

Sequence 1:NP_031833.3 Gene:Cybb / 13058 MGIID:88574 Length:570 Species:Mus musculus
Sequence 2:NP_001259968.1 Gene:Duox / 33477 FlyBaseID:FBgn0283531 Length:1537 Species:Drosophila melanogaster


Alignment Length:584 Identity:153/584 - (26%)
Similarity:265/584 - (45%) Gaps:100/584 - (17%)


- Green bases have known domain annotations that are detailed below.


Mouse    11 SIFVILVWLGLNVFLFINYYKVYDDGPKYNYTRKLLGSALALARAPAACLNFNCMLILLPVCRNL 75
            :||.:.::..:.:.||:..:..|....::...|.::|..:|:.|..||.|:|...|:||.:.|||
  Fly  1029 NIFYLFLFYVVTIVLFVERFIHYSFMAEHTDLRHIMGVGIAITRGSAASLSFCYSLLLLTMSRNL 1093

Mouse    76 LSFLRGSSACCSTRIRR--QLDRNLTFHKMVAWMIALHTAIHTIAHLFNVEWCVNARVGISDRYS 138
            ::.|:      ...|::  .||.::.|||:.|......:.:||:.|:.|.             |.
  Fly  1094 ITKLK------EFPIQQYIPLDSHIQFHKIAACTALFFSVLHTVGHIVNF-------------YH 1139

Mouse   139 IALSDIGDNENEEYL----NFAREKIKNPEGGLYVAVTRLAGITGIVITLCLILIITSSTKTIRR 199
            ::..   .:||...|    :||.:...:....|:..||   |.||:::.:.:.:|...:..|||:
  Fly  1140 VSTQ---SHENLRCLTREVHFASDYKPDITFWLFQTVT---GTTGVMLFIIMCIIFVFAHPTIRK 1198

Mouse   200 SYFEVFWYTHHLFVIFFIGLAIHGAERIVRGQTAESLEEHNLDICADKIEEWGKIKECPVPKFAG 264
            ..:..||..|.|::..::...|||..|:.                                    
  Fly  1199 KAYNFFWNMHTLYIGLYLLSLIHGLARLT------------------------------------ 1227

Mouse   265 NPPMTWKWIVGPMFLYLCERLVRFWRSQQKVVITKVVTHPFKTIELQM-KKKGFKMEVGQYIFVK 328
            .||..|.:.:||..:|..:::|........:.:......|...|:::. :....|...||::.:.
  Fly  1228 GPPRFWMFFLGPGIVYTLDKIVSLRTKYMALDVIDTDLLPSDVIKIKFYRPPNLKYLSGQWVRLS 1292

Mouse   329 CPKVSKLEWHPFTLTSAPEEDFFSIHIRIVGDWT---EGLFNACGCDKQEFQDAWKLPKIAVDGP 390
            |......|.|.|||||||.|:|.|.||:..|.||   ...|:.|..:.::      .|||.::||
  Fly  1293 CTAFRPHEMHSFTLTSAPHENFLSCHIKAQGPWTWKLRNYFDPCNYNPED------QPKIRIEGP 1351

Mouse   391 FGTASEDVFSYEVVMLVGAGIGVTPFASILKSVWYKYCDNATS-LKLKKIYFYWLCRDTHAFEWF 454
            ||..::|.:.:||.::||.||||||:||||..:.:....|..| :..||:||.|:|.....||||
  Fly  1352 FGGGNQDWYKFEVAVMVGGGIGVTPYASILNDLVFGTSTNRYSGVACKKVYFLWICPSHKHFEWF 1416

Mouse   455 ADLLQLLETQMQERNNANFLSYNIYLTGWDES----------QANHFAVHHDEEKDVITGLKQKT 509
            .|:|:    .:::::..|.|..:|::|.:...          ..|||  ....:..:.||||...
  Fly  1417 IDVLR----DVEKKDVTNVLEIHIFITQFFHKFDLRTTMLYICENHF--QRLSKTSIFTGLKAVN 1475

Mouse   510 LYGRPNWDNEFKTIASEHPNTT-IGVFLCGPEALAETLSK--QSISNSESGPRGVHFIFNKENF 570
            .:|||:..:..|.:..:|...: ||||.|||..|.:::..  ..::.:...|   :||.:.|||
  Fly  1476 HFGRPDMSSFLKFVQKKHSYVSKIGVFSCGPRPLTKSVMSACDEVNKTRKLP---YFIHHFENF 1536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CybbNP_031833.3 Ferric_reduct 66..219 CDD:366815 38/158 (24%)
PLN02844 <165..>423 CDD:215453 72/261 (28%)
NOX_Duox_like_FAD_NADP 297..570 CDD:99783 89/290 (31%)
DuoxNP_001259968.1 An_peroxidase 70..580 CDD:281139
dual_peroxidase_like 72..625 CDD:188652
EFh 827..882 CDD:238008
EFh 860..921 CDD:238008
EF-hand_7 860..920 CDD:290234
EFh 895..966 CDD:238008
EF-hand_7 899..965 CDD:290234
Ferric_reduct 1084..1217 CDD:280043 38/157 (24%)
NOX_Duox_like_FAD_NADP 1265..1536 CDD:99783 89/285 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0039
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000155
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100242
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X184
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.710

Return to query results.
Submit another query.