DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cttn and Cortactin

DIOPT Version :9

Sequence 1:NP_031829.2 Gene:Cttn / 13043 MGIID:99695 Length:546 Species:Mus musculus
Sequence 2:NP_001247222.1 Gene:Cortactin / 42491 FlyBaseID:FBgn0025865 Length:559 Species:Drosophila melanogaster


Alignment Length:666 Identity:254/666 - (38%)
Similarity:310/666 - (46%) Gaps:234/666 - (35%)


- Green bases have known domain annotations that are detailed below.


Mouse     1 MWKASAGHAVSITQ----DDGGADDWETDPDFVNDVSEKEQRWGAKTVQGSGHQE-HINIHKLRE 60
            ||||||||.:..|.    :|   |||||||||||||||:|||||:||:.|||... .|::.||||
  Fly     1 MWKASAGHQIQATSAASAED---DDWETDPDFVNDVSEQEQRWGSKTIDGSGRTAGTIDMDKLRE 62

Mouse    61 NVFQEHQTLKEKELETGPKASHGYGGKFGVEQDRMDRSAVGHEYQSKLSKHCSQVDSVRGFGGKF 125
            .. ::....|:|:|.....|.:|||||||||:||||:|||||                       
  Fly    63 ET-EQADLDKKKQLLKDQNAGYGYGGKFGVEKDRMDKSAVGH----------------------- 103

Mouse   126 GVQMDRVDQSAVGFEYQGKTEKHASQKDYSSGFGGKYGVQADRVDKSAVGFDYQGKTEKHESQKD 190
                          :||||..|||||||||.|||||:|||.||.||||||:|:..|.|||.||||
  Fly   104 --------------DYQGKVGKHASQKDYSDGFGGKFGVQEDRKDKSAVGWDHVEKVEKHASQKD 154

Mouse   191 YSKGFGGKYGIDKDKVDKSAVGFEYQGKTEKHESQKDYVKGFGGKFGVQTDRQDKCALGWDHQEK 255
            |:.|||||:|:..|:|||||||:::..|.|||||||||.||||||||||.||:||.|:||||:|.
  Fly   155 YATGFGGKFGVQSDRVDKSAVGWDHIEKVEKHESQKDYSKGFGGKFGVQEDRKDKSAVGWDHKEA 219

Mouse   256 LQLHESQKDYKTGFGGKFGVQSERQDSSAVGFDYKERLAKHESQQDYAKGFGGKYGVQKDRMDKN 320
            .|.|.||.|:|.                                                     
  Fly   220 PQKHASQVDHKV----------------------------------------------------- 231

Mouse   321 ASTFEEVVQVPSAYQKTVPIEAVTSKTSNIRANFENLAKEREQEDRRKAEAERAQRMAKERQEQE 385
                           |.| ||.  :|.||:||.||||||..|:|.|::||.::..|.||:::::|
  Fly   232 ---------------KPV-IEG--AKPSNLRAKFENLAKNSEEESRKRAEEQKRLREAKDKRDRE 278

Mouse   386 EARRK--LEEQARAKKQTPPASPS----------------------PQPIEDRPPSSP---IYED 423
            ||.:|  .|...|...:.||...|                      ..|:.:.||:..   |...
  Fly   279 EAAKKTVAENTPRTSTEAPPPKGSRAAIQTGRTGGIGNAISAFNQMQSPVSETPPARKEPIIIPK 343

Mouse   424 AAPFKAEPSYR--------------------GSEPE---------------PEYSIEAAGIPEAG 453
            |.|.|.|...:                    ..|||               |:..:|....|...
  Fly   344 AQPVKIELEAKEEPTASTTSAAVAPTPTVVPAREPETAPVAKAAAPPPDVVPQIEVETVDTPPRS 408

Mouse   454 SQQGLTYT----------------------------SEPVYE----------------------- 467
            ..|...|.                            .||:|:                       
  Fly   409 EPQSPVYVPTPQPEVHAQVQVQPEPQPQADPEPVVEEEPLYQNQAEIKAASPLPPTNGTVSEAVA 473

Mouse   468 ---TTEAPGH-YQAEDDTYDGYESDLGITAIALYDYQAAGDDEISFDPDDIITNIEMIDDGWWRG 528
               |...|.. ..|..|....|..|.||.||||||||||.||||||||||:||:||.||||||||
  Fly   474 PSGTATVPEEAIYANSDNLADYLEDTGIHAIALYDYQAADDDEISFDPDDVITHIEKIDDGWWRG 538

Mouse   529 VCKGRYGLFPANYVEL 544
            :||.||||||||||::
  Fly   539 LCKNRYGLFPANYVQV 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CttnNP_031829.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..28 17/30 (57%)
Cortactin 1 80..116 19/35 (54%)
HS1_rep 83..116 CDD:280396 18/32 (56%)
Cortactin 2 117..153 9/35 (26%)
HS1_rep 120..155 CDD:280396 11/34 (32%)
Cortactin 3 154..190 25/35 (71%)
HS1_rep 157..192 CDD:280396 25/34 (74%)
Cortactin 4 191..227 22/35 (63%)
HS1_rep 194..228 CDD:280396 22/33 (67%)
Cortactin 5 228..264 25/35 (71%)
HS1_rep 231..266 CDD:280396 24/34 (71%)
Cortactin 6 265..301 1/35 (3%)
HS1_rep 268..303 CDD:280396 0/34 (0%)
Cortactin 7, truncated 302..324 0/21 (0%)
HS1_rep 305..>330 CDD:280396 0/24 (0%)
TAF4 <336..>399 CDD:296797 29/64 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 355..424 26/95 (27%)
SH3_Cortactin 492..544 CDD:212892 44/51 (86%)
CortactinNP_001247222.1 HS1_rep 84..119 CDD:396686 29/71 (41%)
HS1_rep 121..156 CDD:396686 25/34 (74%)
HS1_rep 158..193 CDD:396686 23/34 (68%)
HS1_rep 195..229 CDD:396686 23/33 (70%)
rne <327..489 CDD:236766 22/161 (14%)
SH3_Cortactin 502..554 CDD:212892 44/51 (86%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 99 1.000 Domainoid score I7102
eggNOG 1 0.900 - - E1_28JSJ
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3834
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48031
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004044
OrthoInspector 1 1.000 - - oto92113
orthoMCL 1 0.900 - - OOG6_105161
Panther 1 1.100 - - O PTHR10829
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5379
SonicParanoid 1 1.000 - - X2789
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.810

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