DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ACVR1C and daf-1

DIOPT Version :9

Sequence 1:NP_660302.2 Gene:ACVR1C / 130399 HGNCID:18123 Length:493 Species:Homo sapiens
Sequence 2:NP_001023159.1 Gene:daf-1 / 176829 WormBaseID:WBGene00000897 Length:669 Species:Caenorhabditis elegans


Alignment Length:537 Identity:187/537 - (34%)
Similarity:267/537 - (49%) Gaps:107/537 - (19%)


- Green bases have known domain annotations that are detailed below.


Human    39 TCQTEGACWASVMLTNGKEQVIKSCVSLPELNAQVFCHSSNNVT-KTE----------------- 85
            ||.|:|:|:.|...:             ||: :...|....:|| :||                 
 Worm    89 TCYTDGSCYQSARPS-------------PEI-SHFGCMDEKSVTDETEFHDTAAKVCTNNTKDPH 139

Human    86 -----CCFT-DFCNNIT-LHLPTASPNAPKLGPMELA--IIITVP-----VCLLSIAAMLTVWAC 136
                 ||.. :||.|.| :||      ||  ||.:.:  :|:|:.     :.||.||..||..:.
 Worm   140 ATVWICCDKGNFCANETIIHL------AP--GPQQSSTWLILTILALLTFIVLLGIAIFLTRKSW 196

Human   137 QGRQCSY-RKKKRPNVEEPLSECN----LVNAG-------------------------------- 164
            :.:...| |.|.:|.  :||.|..    :|..|                                
 Worm   197 EAKFDWYIRFKPKPG--DPLRETENNVPMVTMGDGAGSSVPEVAPIEQQGSTMSTSAGNSFPPGI 259

Human   165 --KTLKDLIYDV--TASGSGSGLPLLVQRTIARTIVLQEIVGKGRFGEVWHGRWCGEDVAVKIFS 225
              ..:||:: ||  ..||||.|...|.:.||...|.|...||.||||.|..|.:.||.||||:|:
 Worm   260 MPNNMKDML-DVLEETSGSGMGPTTLHKLTIGGQIRLTGRVGSGRFGNVSRGDYRGEAVAVKVFN 323

Human   226 SRDERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSEYHEQGSLYDYLNRNIVTVA 290
            :.||.::.:|.||::|.||||.|:|.:|.:|..|.|..|:||||:|||..|||:|:|..|.|.:.
 Worm   324 ALDEPAFHKETEIFETRMLRHPNVLRYIGSDRVDTGFVTELWLVTEYHPSGSLHDFLLENTVNIE 388

Human   291 GMIKLALSIASGLAHLHMEIVGTQ--GKPAIAHRDIKSKNILVKKCETCAIADLGLAV-KHDSIL 352
            ....|..|.|||||.||.:|.|::  .|||:||||||||||:||...||||.||||:: |.:...
 Worm   389 TYYNLMRSTASGLAFLHNQIGGSKESNKPAMAHRDIKSKNIMVKNDLTCAIGDLGLSLSKPEDAA 453

Human   353 NTIDIPQNPKVGTKRYMAPEMLDDTMNVNIFESFKRADIYSVGLVYWEIARRCSVGGIVEEYQ-- 415
            :.|...:|.|.||.||:|||:|:.||...:|||::.||:||..||.||...||..|.::....  
 Worm   454 SDIIANENYKCGTVRYLAPEILNSTMQFTVFESYQCADVYSFSLVMWETLCRCEDGDVLPREAAT 518

Human   416 -LPYYDMVPSDPSIEEMRKVVCDQKFRPSIPNQWQSCEALRVMGRIMRECWYANGAARLTALRIK 479
             :||.:....||...:|..|||.::.||:....|:....::.:..|::.||..|.:||.|:...:
 Worm   519 VIPYIEWTDRDPQDAQMFDVVCTRRLRPTENPLWKDHPEMKHIMEIIKTCWNGNPSARFTSYICR 583

Human   480 KTI---SQLCVKEDCKA 493
            |.:   .||.:.:..||
 Worm   584 KRMDERQQLLLDKKAKA 600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ACVR1CNP_660302.2 Activin_recp 26..100 CDD:279413 20/85 (24%)
TGF_beta_GS 166..193 CDD:285687 12/28 (43%)
Pkinase_Tyr 195..478 CDD:285015 128/288 (44%)
STKc_TGFbR1_ACVR1b_ACVR1c 199..486 CDD:271045 128/295 (43%)
daf-1NP_001023159.1 GS 265..293 CDD:197743 12/28 (43%)
Pkinase_Tyr 293..576 CDD:285015 125/282 (44%)
STKc_TGFbR_I 297..589 CDD:270958 127/291 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C161451956
Domainoid 1 1.000 236 1.000 Domainoid score I1477
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 248 1.000 Inparanoid score I2302
Isobase 1 0.950 - 0 Normalized mean entropy S3517
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000203
OrthoInspector 1 1.000 - - otm16226
orthoMCL 1 0.900 - - OOG6_103647
Panther 1 1.100 - - LDO PTHR23255
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5155
SonicParanoid 1 1.000 - - X151
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1211.870

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