DRSC/TRiP Functional Genomics Resources

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Protein Alignment TMEM18 and Tmem18

DIOPT Version :10

Sequence 1:NP_001339610.1 Gene:TMEM18 / 129787 HGNCID:25257 Length:143 Species:Homo sapiens
Sequence 2:NP_001007749.1 Gene:Tmem18 / 362722 RGDID:1359389 Length:140 Species:Rattus norvegicus


Alignment Length:123 Identity:97/123 - (78%)
Similarity:113/123 - (91%) Gaps:0/123 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    21 LLQTDWTEPWLMGLATFHALCVLLTCLSSRSYRLQIGHFLCLVILVYCAEYINEAAAMNWRLFSK 85
            :::||||||||:||..||.||:||||.|::.|:||||||||||:||||||||||.||||||||:|
  Rat    18 IMETDWTEPWLLGLLAFHLLCLLLTCFSAQRYKLQIGHFLCLVVLVYCAEYINEVAAMNWRLFAK 82

Human    86 YQYFDSRGMFISIVFSAPLLVNAMIIVVMWVWKTLNVMTDLKNAQERRKEKKRRRKED 143
            ||||||||||||:|||||||.|||:||:|||.|||.||:||||.||||||:||||||:
  Rat    83 YQYFDSRGMFISLVFSAPLLFNAMVIVIMWVRKTLTVMSDLKNLQERRKERKRRRKEE 140

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TMEM18NP_001339610.1 TMEM18 21..130 CDD:405460 85/108 (79%)
Tmem18NP_001007749.1 TMEM18 16..127 CDD:405460 85/108 (79%)
DNA-binding. /evidence=ECO:0000250 113..140 21/26 (81%)
Nuclear localization signal. /evidence=ECO:0000250 130..138 6/7 (86%)

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