DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Dmbt1 and Corin

DIOPT Version :9

Sequence 1:XP_006507361.2 Gene:Dmbt1 / 12945 MGIID:106210 Length:2061 Species:Mus musculus
Sequence 2:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster


Alignment Length:827 Identity:155/827 - (18%)
Similarity:223/827 - (26%) Gaps:351/827 - (42%)


- Green bases have known domain annotations that are detailed below.


Mouse   532 EDAGVICSASQSSS------------------PTPDVFYPTDQTT---------AEQTTVPDYTP 569
            |.:.|..|||.||:                  |.|.|..|||..|         ..|..|  :.|
  Fly   427 EPSSVSASASTSSAASAGSSTISSGTMSSMSGPCPAVVPPTDAITKRPGPPEPPLRQANV--FDP 489

Mouse   570 IGTDS------GLAVRLVNGGD--------RCQGRVEILYQGSWGTVCDDSWDLN---------- 610
            :.|.|      .|.||...|.:        |.|.|.:       .|:..||:.::          
  Fly   490 VETGSRGHPPPPLTVRNKLGRNKPPPITYPRMQQRQD-------STLSSDSYSISSSPGYNSKLM 547

Mouse   611 DANVVCRQLGCGLAVSAPGSA------------RF----GQGT-----GPIV------------- 641
            :|.::..|.| |...:|||||            ||    |.||     ||.:             
  Fly   548 EAPLLGSQQG-GRKSNAPGSAQRQTPLMDLAPTRFLGGAGGGTGSGKQGPAMPPPRSKINFRQDS 611

Mouse   642 ------MDDVACGGYEDYLWRCSHRGWLSHNCGHHEDAGVICSASQSSSPTPDV------FYPTD 694
                  ....:..||...|........||        |..:|||     |.|.|      ..|.:
  Fly   612 TISSDSFSQTSSPGYNPKLMEAPLLPSLS--------AKRLCSA-----PAPIVCRQGVQHEPIE 663

Mouse   695 QTTAEQTTVPDYTTIGTENSL--AVRLENGGDR-------------------------------- 725
            :....||..|.:...|..:||  .||.:||...                                
  Fly   664 ELEPPQTISPLHKAAGQPSSLQTIVRFQNGAPHTMSLQHQIINRRKSSNPYITNGRLKFRLFQIL 728

Mouse   726 ----------------------------------------------------------CQG---- 728
                                                                      |||    
  Fly   729 INAFALLAIAGGLAAYFNAYPTIKFVNKTIINTIHVEDTTSFGKNPAPGTCLPIIVRFCQGPQIP 793

Mouse   729 ---RVEILYQGSWG---TVCD-DSW----DLNDANVV-----------CRQLG------------ 759
               .|...|.|.:|   |..| ||:    |:....:|           |.|.|            
  Fly   794 YNYTVFPNYIGHFGQLETQTDLDSYEALVDVRCYELVSLFLCTLFVPKCGQSGATVPPCKTLCTE 858

Mouse   760 ----CG-----LAVSAPGSAR------FGQGTGPIVMDDV----------ACGGYEDYLWRCSHR 799
                ||     ..:|.|....      |......:.:|:|          .|.|::....||..:
  Fly   859 TMRRCGFFFDVFGLSLPEYLNCKLFKDFPSSEDCVGLDEVREVMRAATHPKCDGFQCDQNRCLPQ 923

Mouse   800 GWLSHNCGHHEDAGVICSASQSSSPTPDVFYPTDQTTVEQTTVPD---YTPIGTENSLAVRL-EN 860
            .::   |..|.|.......::.....||..|..|...:....:.|   ..|.|.:....:|| |.
  Fly   924 EYV---CDGHLDCMDQADEAKCERCGPDEIYCGDSQCIGTKHICDGIIDCPYGQDERNCLRLSER 985

Mouse   861 GGDRCQGRVEI--LYQGSWGTVCDDSWD-TKDANVVCRQLGCGWAVSAPG--------------N 908
            .||...|.:|:  :.|..|...|..:|| ....:.||..||.. ||:|..              |
  Fly   986 NGDVGTGVLEVYRIGQRQWMPACVKNWDRAVSPSAVCSILGYS-AVNATSVLTQLTHRPLLATVN 1049

Mouse   909 A------YFGPGSGSIVLDDVACTGHEDYLW---SCSHRGWLSHNC-----GHHEDAGVICSDAQ 959
            .      .:.....:::.:...|...|||..   :||     ::.|     |.|:.:..|....|
  Fly  1050 VSTDIWKMYAKRKSTLMQEFANCKKTEDYPMADLTCS-----NYECGRVKRGRHKPSRRIIGGTQ 1109

Mouse   960 IQSTTRPDLWPTTTT----PETTTELLTTTPYFDWWTTTSDYSCGGLLTQPSGQFSSPYYPSNYP 1020
                ..|..||....    ||..                  :.|.|:|.......::.:...||.
  Fly  1110 ----ASPGNWPFLAAILGGPEKI------------------FYCAGVLISDQWVLTASHCVGNYS 1152

Mouse  1021 NNARCSWKIVLPNMNRVTVVFTDVQLEGGCNYDYILVYDGPEYNSSL 1067
            ......|.|.|....|.:..::      |.......|...|:||.::
  Fly  1153 VIDLEDWTIQLGVTRRNSFTYS------GQKVKVKAVIPHPQYNMAI 1193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dmbt1XP_006507361.2 SR 33..133 CDD:214555
SR 152..252 CDD:214555
SR 301..401 CDD:214555
SR 439..539 CDD:214555 2/6 (33%)
SR 578..678 CDD:214555 31/157 (20%)
SR 717..817 CDD:214555 34/252 (13%)
SR 856..956 CDD:214555 30/131 (23%)
CUB 999..1107 CDD:238001 14/69 (20%)
CUB 1115..1223 CDD:238001
CUB 1241..1349 CDD:238001
CUB 1357..1465 CDD:238001
SR 1486..1585 CDD:214555
CUB 1609..1717 CDD:238001
ZP 1728..1975 CDD:214579
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549 21/115 (18%)
LDLa 911..942 CDD:238060 6/33 (18%)
LDLa 945..979 CDD:238060 7/33 (21%)
SR 980..>1034 CDD:214555 19/54 (35%)
SRCR 992..1086 CDD:278931 19/94 (20%)
Tryp_SPc 1103..1343 CDD:214473 21/119 (18%)
Tryp_SPc 1104..1346 CDD:238113 21/118 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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