| Sequence 1: | NP_001840.3 | Gene: | COL6A2 / 1292 | HGNCID: | 2212 | Length: | 1019 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_492936.1 | Gene: | col-65 / 187138 | WormBaseID: | WBGene00000641 | Length: | 301 | Species: | Caenorhabditis elegans |
| Alignment Length: | 266 | Identity: | 100/266 - (37%) |
|---|---|---|---|
| Similarity: | 112/266 - (42%) | Gaps: | 57/266 - (21%) |
- Green bases have known domain annotations that are detailed below.
|
Human 332 QKGKLGRIGPPGCKGDPGN--RGPDGYPGEAGSPGERGDQGGKGDPGRPGRRGPPGEIGAKGSKG 394
Human 395 YQGNSGAPGSPGVKGAKGGPGPRGPKGEPGRRGDPGTKGSPGSDGPKGEKGDPGPEGPRGLAGEV 459
Human 460 GNKGAKGDRGLPGPRGPQGALGEPGKQGSRGDPGDAGPRGDSGQPGPKGDPGRPGFSYPGPRGAP 524
Human 525 GEKGEPGPRGPEGGRGDFGLKGEPGRKGEKGEPADPGPPGEPGPRGPRGVPGPEGE--PGPPGDP 587
Human 588 GLTECD 593 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| COL6A2 | NP_001840.3 | Nonhelical region | 21..256 | ||
| vWA_collagen_alpha_1-VI-type | 43..231 | CDD:238757 | |||
| gly_rich_SclB | <255..>513 | CDD:468478 | 67/182 (37%) | ||
| Triple-helical region | 257..590 | 98/261 (38%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 257..588 | 97/259 (37%) | |||
| Cell attachment site. /evidence=ECO:0000255 | 366..368 | 0/1 (0%) | |||
| Cell attachment site. /evidence=ECO:0000255 | 426..428 | 0/1 (0%) | |||
| Collagen | 487..556 | CDD:460189 | 27/68 (40%) | ||
| Cell attachment site. /evidence=ECO:0000255 | 489..491 | 1/1 (100%) | |||
| Cell attachment site. /evidence=ECO:0000255 | 498..500 | 0/1 (0%) | |||
| Cell attachment site. /evidence=ECO:0000255 | 539..541 | 0/1 (0%) | |||
| Nonhelical region | 591..1019 | 2/3 (67%) | |||
| vWA_collagen_alpha_1-VI-type | 612..803 | CDD:238757 | |||
| VWA | 833..1007 | CDD:459670 | |||
| col-65 | NP_492936.1 | Col_cuticle_N | 4..56 | CDD:198156 | |
| gly_rich_SclB | <109..>248 | CDD:468478 | 68/182 (37%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||