| Sequence 1: | NP_001840.3 | Gene: | COL6A2 / 1292 | HGNCID: | 2212 | Length: | 1019 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_509274.1 | Gene: | dpy-7 / 181013 | WormBaseID: | WBGene00001069 | Length: | 318 | Species: | Caenorhabditis elegans |
| Alignment Length: | 268 | Identity: | 107/268 - (39%) |
|---|---|---|---|
| Similarity: | 122/268 - (45%) | Gaps: | 68/268 - (25%) |
- Green bases have known domain annotations that are detailed below.
|
Human 297 PGPKGVPGFKGEKGEFGADGRKGAPGLAGKN-GTDGQKGKLGRIGPPGCKGDPGNRGPDGYPGEA 360
Human 361 GSPGERGDQGGKGDPGRPGRRGPPGEIGAKGSKGYQGNSGAPGSPGVKGAKGGPGPRGPKGEPGR 425
Human 426 RGDPGTKGSPGSD--GPKGEKGDPGPEGPRGLAGEVGNKGAKGDRGLP----GPRGPQGALGEPG 484
Human 485 KQGSRGDPGDAGPRGDSGQPGPKGDPGRPGFSYPGPRG-----AP-------GEKGEPGPRGPEG 537
Human 538 GRGDFGLK 545 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| COL6A2 | NP_001840.3 | Nonhelical region | 21..256 | ||
| vWA_collagen_alpha_1-VI-type | 43..231 | CDD:238757 | |||
| gly_rich_SclB | <255..>513 | CDD:468478 | 94/222 (42%) | ||
| Triple-helical region | 257..590 | 107/268 (40%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 257..588 | 107/268 (40%) | |||
| Cell attachment site. /evidence=ECO:0000255 | 366..368 | 0/1 (0%) | |||
| Cell attachment site. /evidence=ECO:0000255 | 426..428 | 0/1 (0%) | |||
| Collagen | 487..556 | CDD:460189 | 25/71 (35%) | ||
| Cell attachment site. /evidence=ECO:0000255 | 489..491 | 1/1 (100%) | |||
| Cell attachment site. /evidence=ECO:0000255 | 498..500 | 0/1 (0%) | |||
| Cell attachment site. /evidence=ECO:0000255 | 539..541 | 0/1 (0%) | |||
| Nonhelical region | 591..1019 | ||||
| vWA_collagen_alpha_1-VI-type | 612..803 | CDD:238757 | |||
| VWA | 833..1007 | CDD:459670 | |||
| dpy-7 | NP_509274.1 | Col_cuticle_N | 11..62 | CDD:198156 | |
| gly_rich_SclB | <145..>206 | CDD:468478 | 36/96 (38%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||