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Protein Alignment COL6A2 and col-149

DIOPT Version :10

Sequence 1:	NP_001840.3	Gene:	COL6A2 / 1292	HGNCID:	2212	Length:	1019	Species:	Homo sapiens
Sequence 2:	NP_505646.1	Gene:	col-149 / 179431	WormBaseID:	WBGene00000722	Length:	297	Species:	Caenorhabditis elegans

Alignment Length:	329	Identity:	110/329 - (33%)
Similarity:	136/329 - (41%)	Gaps:	109/329 - (33%)

- Green bases have known domain annotations that are detailed below.

Human   230 TINRI-------IKVMKHE---AYGECYKVSCLEIPGPSGPKG------YRGQKGAKGNMG---- 274
            |||.:       :|:.:.:   |:.|...|..:..| ||.||.      :| ||......|
Worm    32 TINEMHDEVLDGVKMFRADTDAAWVEMLDVQVMVSP-PSQPKENPFNSVFR-QKRRSTFSGLPAW 94

Human   275 ---EPGEPGQKGRQGDPGIEGPIGFPGPKGVPGFKGEKGEFGADGRKGAPGLAGKNGTDGQKGKL 336
               ||.:|           :.|.|.|||.|.|            |::|.||:.|:||.|    ..
Worm    95 CQCEPTKP-----------KCPRGPPGPPGHP------------GQRGIPGIPGRNGQD----NY 132

Human   337 GRIGPPGCKGDPGNRG----PDGYPGEAGSPGERGDQGGKGDPGRPGRRGPPGEIGAKGSKGYQG 397
            ..|..|.|  .|.|:.    |.|.||.:|:.|:.|..|..|.||:||||               |
Worm   133 NTIRAPAC--PPRNQDCIKCPAGPPGPSGTCGQVGRPGPDGRPGQPGRR---------------G 180

Human   398 NSGAPGSPGVKGAKGGPGPRGPKGEPGRRGDPGTKGSPGSDGPKGEKGDPGPEGPRGLAGEVGNK 462
            |.|.||.         |||:|..|:|||.|:||..|.||.||.:|.                |:.
Worm   181 NDGRPGQ---------PGPQGNAGQPGRDGNPGQPGHPGKDGRRGH----------------GSP 220

Human   463 GAKGDRGLPGPRGPQGALGEPGKQGSRGDPGDAGPRGDSGQPGPKGDPGRPGFSYPGPRGAPGEK 527
            ||.|..|.|   |.|||.|.||:.|.||..|..||.|.|||||.:|..|.|        ||||..
Worm   221 GAPGRAGQP---GRQGAPGNPGRPGERGPSGPCGPAGRSGQPGNRGSDGHP--------GAPGNP 274

Human   528 GEPG 531
            |..|
Worm   275 GLQG 278

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.