| Sequence 1: | NP_001840.3 | Gene: | COL6A2 / 1292 | HGNCID: | 2212 | Length: | 1019 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_498819.2 | Gene: | clec-160 / 176167 | WormBaseID: | WBGene00017322 | Length: | 639 | Species: | Caenorhabditis elegans |
| Alignment Length: | 265 | Identity: | 58/265 - (21%) |
|---|---|---|---|
| Similarity: | 95/265 - (35%) | Gaps: | 59/265 - (22%) |
- Green bases have known domain annotations that are detailed below.
|
Human 569 RGPRGVPGPEGEPGPPGDPGLTECDVMTYVRETCGCCDCEKRCGALDVVFVIDSSESIGYTNFTL 633
Human 634 EKNFVINVVNRLGAIAKDPKSETGTRVGVVQYS-------------HEGTFEAIQLDDERIDSLS 685
Human 686 SFKEAVKNLEWIAGGTWTPSALKFAYDRLIKESRRQKTRVFAVVIT-------DGRHDPRDDDLN 743
Human 744 LRALCDRDVTVTAIGIGDMFHEKHESENLYSIACDKPQQVRNMTLFSDLVAEKFIDDMEDVLCPD 808
Human 809 PQIVC 813 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| COL6A2 | NP_001840.3 | Nonhelical region | 21..256 | ||
| vWA_collagen_alpha_1-VI-type | 43..231 | CDD:238757 | |||
| gly_rich_SclB | <255..>513 | CDD:468478 | |||
| Triple-helical region | 257..590 | 7/20 (35%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 257..588 | 6/18 (33%) | |||
| Cell attachment site. /evidence=ECO:0000255 | 366..368 | ||||
| Cell attachment site. /evidence=ECO:0000255 | 426..428 | ||||
| Collagen | 487..556 | CDD:460189 | |||
| Cell attachment site. /evidence=ECO:0000255 | 489..491 | ||||
| Cell attachment site. /evidence=ECO:0000255 | 498..500 | ||||
| Cell attachment site. /evidence=ECO:0000255 | 539..541 | ||||
| Nonhelical region | 591..1019 | 51/243 (21%) | |||
| vWA_collagen_alpha_1-VI-type | 612..803 | CDD:238757 | 42/210 (20%) | ||
| VWA | 833..1007 | CDD:459670 | |||
| clec-160 | NP_498819.2 | VWA | 31..214 | CDD:214621 | |
| vWFA | 276..457 | CDD:469594 | 40/213 (19%) | ||
| CLECT | 478..619 | CDD:214480 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||