Sequence 1: | XP_006724680.1 | Gene: | COL4A6 / 1288 | HGNCID: | 2208 | Length: | 1708 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_723044.1 | Gene: | Col4a1 / 33727 | FlyBaseID: | FBgn0000299 | Length: | 1779 | Species: | Drosophila melanogaster |
Alignment Length: | 1813 | Identity: | 801/1813 - (44%) |
---|---|---|---|
Similarity: | 952/1813 - (52%) | Gaps: | 264/1813 - (14%) |
- Green bases have known domain annotations that are detailed below.
Human 41 QCFPEKGARGRPGPIGIQGPTGPQGFTGSTGLSGLKGERGFPGLLGPYGPKGDKGPMGVPGFLGI 105
Human 106 NGIPGHPGQPGPRGPPGLDGCNGTQGAVGFPGPDGYPGLLGPPGLPGQ---KGSKGDPVLAPGSF 167
Human 168 -KGMKGDPGLPGLDGITGPQGAPGFPGAVGPAGPPGLQGPPGPPGPLGPDGNMGLG--FQGEKGV 229
Human 230 KGDVGLPGPAGPPPSTGELEFMGFPKGKKGSKGEPGPKGFPGISGPPGFPGLGTTGEKGEKGEKG 294
Human 295 IPGLPGPRGPMGSEGVQGPPGQQGKKGTLGFPGLNGFQGIEGQKGD------IGLPGPDVFIDID 353
Human 354 GAVISGNPGDP----GVPGLPGLKGDEGIQGLRGP---SGVPGLPALSGVPGALGPQGFPGLKGD 411
Human 412 QGNPGRT-TIGAAGLPGRDGLPGPPGPPGPPSPEFETETLHNKESGFPGLRGEQGPKGNL----- 470
Human 471 -GLKGIKGDSGFCACDGGVP------NTGPPGEPGPPGPWGLIGLPGLKGARGDRG--------- 519
Human 520 ----SG--GAQGPAGAPGLVGPLGPSGPKGKKGEP------ILSTIQGMPGDRGDSGSQGFRGVI 572
Human 573 GEPGK---------------DGVPGLP------------GLPGLPGDGGQ-GFPGEKGLPGLPGE 609
Human 610 KGHPGP------PGLPG---NGLPGLPGPRGLPGDKGKDGLPGQQGLPGSKGDCCCREVGKGDLD 665
Human 666 TERGITLPCIIPGSYGPSGFPGTPGFPGPKGSRGLPGTPGQPGSSGSKGEPGSPGLVHLPELP-G 729
Human 730 FPGPRGEK---GLPGFPGLPGKDGLPGMIGSPGLPGSKGATGDIFGAENGAPGEQGLQGLTGHKG 791
Human 792 FLGDSGLPGLKGVHGKPGLLGPKGERGSPGTPGQVGQPGTPGSSGPYGIKGKSGLPGAPGFPGIS 856
Human 857 GHPGKKGTRGKKGPPGSIVKKGLPGLKGLPGN---PGLVGLKGSPGSPGVAGLPALSGPKGEKGS 918
Human 919 VGFVGFPGIP----GLPGIPGTRGLKGIPGSTGKMGPSGRAGTPGEKGDRGNP---GPVGIPSPR 976
Human 977 RPMSNLWLKGDKGSQGSAGSNGFPGPRGDKGEAGRPGPPGLPGAPGLPGIIKGVSGKPGPPGFMG 1041
Human 1042 IRGLPGL---------KGSSGITGFPGMPGESGSQGIRGSPGLPGASGLPGLKGDNGQTVEISGS 1097
Human 1098 PGPKGQPGESGFKGTKGRDGLIGNIGFPGNKGEDGKVGVSGDVGLPGAPGFPGVAGMRGEPGLP- 1161
Human 1162 ------------GSSGHQGAIGPLGSPGLIGPKGFPGFPGLHGLNGLPGTKGTHGTPGPSITGVP 1214
Human 1215 GPAGLPGPKGEKGYPGIGI----GAPGKPGLRGQKGDRGFPGLQGPAGLPGAPG----ISLPSLI 1271
Human 1272 AGQPGDPGRPGLDGERGRPGPAGPPGPPGPSSNQGDTGDPGFP------GIPGPKGPKGDQGIPG 1330
Human 1331 FSGLPGELGLKGMRGEPGFMGTPGKVGPPGDPGFPGMKGKAGPRGSSGL---QGDPGQTPTAEAV 1392
Human 1393 QVPPGPL---GLPGIDGIPGLTGDPGAQGPVGLQGSKGLPGIPGKDGPSGLPGPPGALGDPGLPG 1454
Human 1455 LQGPPGFEGAPGQQGPFGMPGMPGQSMRVGYTLVKHSQSEQVPPCPIGMSQLWVGYSLLFVEGQE 1519
Human 1520 KAHNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWLSTTAPIPMMPVSQTQIPQYISR 1584
Human 1585 CSVCEAPSQAIAVHSQDITIPQCPLGWRSLWIGYSFLMHTAAGAEGGGQSLVSPGSCLEDFRATP 1649
Human 1650 FIECSGARGTCHYFANKYSFWLTTVEERQQFGELPVSETLKAGQLHTRVSRCQVCMKS 1707 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
COL4A6 | XP_006724680.1 | Collagen | 359..416 | CDD:189968 | 28/63 (44%) |
Collagen | 681..740 | CDD:189968 | 29/62 (47%) | ||
Collagen | 800..859 | CDD:189968 | 25/58 (43%) | ||
Collagen | 905..964 | CDD:189968 | 30/62 (48%) | ||
Collagen | 1029..1088 | CDD:189968 | 29/67 (43%) | ||
Collagen | 1150..1208 | CDD:189968 | 26/70 (37%) | ||
C4 | 1485..1589 | CDD:279721 | 62/103 (60%) | ||
C4 | 1593..1705 | CDD:279721 | 71/111 (64%) | ||
Col4a1 | NP_723044.1 | Collagen | 104..161 | CDD:189968 | 29/59 (49%) |
Collagen | 322..380 | CDD:189968 | 32/60 (53%) | ||
Collagen | 413..465 | CDD:189968 | 22/51 (43%) | ||
Collagen | 499..561 | CDD:189968 | 24/62 (39%) | ||
Collagen | 574..632 | CDD:189968 | 19/57 (33%) | ||
Collagen | 657..714 | CDD:189968 | 24/56 (43%) | ||
Collagen | 765..824 | CDD:189968 | 29/62 (47%) | ||
Collagen | 854..911 | CDD:189968 | 26/62 (42%) | ||
Collagen | 884..943 | CDD:189968 | 27/64 (42%) | ||
Collagen | 923..982 | CDD:189968 | 25/58 (43%) | ||
Collagen | 1028..1085 | CDD:189968 | 26/71 (37%) | ||
Collagen | 1229..1287 | CDD:189968 | 24/65 (37%) | ||
Collagen | 1318..1376 | CDD:189968 | 28/61 (46%) | ||
Collagen | 1399..1458 | CDD:189968 | 29/58 (50%) | ||
Collagen | 1477..1534 | CDD:189968 | 24/56 (43%) | ||
C4 | 1555..1662 | CDD:128421 | 65/106 (61%) | ||
C4 | 1663..1777 | CDD:128421 | 73/114 (64%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 164 | 1.000 | Domainoid score | I3938 |
eggNOG | 1 | 0.900 | - | - | E33208_3BAFZ | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 1354 | 1.000 | Inparanoid score | I139 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D41315at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000443 | |
OrthoInspector | 1 | 1.000 | - | - | otm41900 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100768 | |
Panther | 1 | 1.100 | - | - | O | PTHR24023 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2460 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
11 | 10.900 |