DRSC/TRiP Functional Genomics Resources

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Protein Alignment PROKR2 and Lkr

DIOPT Version :10

Sequence 1:NP_658986.1 Gene:PROKR2 / 128674 HGNCID:15836 Length:384 Species:Homo sapiens
Sequence 2:NP_647968.3 Gene:Lkr / 38622 FlyBaseID:FBgn0035610 Length:542 Species:Drosophila melanogaster


Alignment Length:383 Identity:100/383 - (26%)
Similarity:183/383 - (47%) Gaps:46/383 - (12%)


- Green bases have known domain annotations that are detailed below.


Human    19 DHASSLSFNFSYGDYDLPMDEDEDMTKTRTFFAAKIV--IGIALAGIMLVCGIGNFVFIAALTRY 81
            :..|.|.|        ||..|:|...:......|:||  :.|...||.:|..|||.:.|..:...
  Fly     7 EQESRLEF--------LPGAEEEAEFERLYAAPAEIVALLSIFYGGISIVAVIGNTLVIWVVATT 63

Human    82 KKLRNLTNLLIANLAISDFLVAIICCPFEMDYYVVRQLSWEHGHVLCASVNYLRTVSLYVSTNAL 146
            :::|.:||:.|||||.:|.::.:.|.||:....:::  ||.....:|:...:::.:|:.||...|
  Fly    64 RQMRTVTNMYIANLAFADVIIGLFCIPFQFQAALLQ--SWNLPWFMCSFCPFVQALSVNVSVFTL 126

Human   147 LAIAIDRYLAIVHPLKPRMNYQTASFLIALVWMVSILIAIPSAY-FATETVLFIVKSQEKI---- 206
            .||||||:.||::||:.|.....:.|:|..:||:::|.|:|.|. |..|.:....:...:.    
  Fly   127 TAIAIDRHRAIINPLRARPTKFVSKFIIGGIWMLALLFAVPFAIAFRVEELTERFRENNETYNVT 191

Human   207 --FCGQIWPVDQQLYYKSYFLFIFGVEFVGPVVTMTLCYARISRELWFKAVPG-FQTEQIRKRLR 268
              ||......|.||....|.| :| |:::.|...::..|.:::..||....|| .|..:....|:
  Fly   192 RPFCMNKNLSDDQLQSFRYTL-VF-VQYLVPFCVISFVYIQMAVRLWGTRAPGNAQDSRDITLLK 254

Human   269 CRRKTVLVLMCILTAYVLCWAPFYGFTIVRDFFPTVFVKEKHYLT-AFYVVECIAMSNSMIN--- 329
            .::|.:.:|:.::..:.|||.|...:.|:....|.  :.:.|::: .::..:.:|||||..|   
  Fly   255 NKKKVIKMLIIVVIIFGLCWLPLQLYNILYVTIPE--INDYHFISIVWFCCDWLAMSNSCYNPFI 317

Human   330 ----------------TVCFVTVKNNTMKYFKKMMLLHWRPSQ-RGSKSSADLDLRTN 370
                            ..||...| .:|...::...:|.|.|. |.:.:::.:.:|:|
  Fly   318 YGIYNEKFKREFNKRFAACFCKFK-TSMDAHERTFSMHTRASSIRSTYANSSMRIRSN 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PROKR2NP_658986.1 7tmA_prokineticin-R 54..344 CDD:320332 86/319 (27%)
TM helix 1 55..81 CDD:320332 9/27 (33%)
TM helix 2 88..113 CDD:320332 11/24 (46%)
TM helix 3 128..158 CDD:320332 12/29 (41%)
TM helix 4 169..190 CDD:320332 7/20 (35%)
TM helix 5 220..249 CDD:320332 6/28 (21%)
TM helix 6 268..298 CDD:320332 7/29 (24%)
TM helix 7 312..337 CDD:320332 8/44 (18%)
LkrNP_647968.3 7tmA_leucokinin-like 36..329 CDD:320515 80/298 (27%)
TM helix 1 37..63 CDD:320515 8/25 (32%)
TM helix 2 70..95 CDD:320515 11/24 (46%)
TM helix 3 108..138 CDD:320515 12/29 (41%)
TM helix 4 149..170 CDD:320515 7/20 (35%)
TM helix 5 205..234 CDD:320515 7/30 (23%)
TM helix 6 254..284 CDD:320515 7/29 (24%)
TM helix 7 297..322 CDD:320515 6/24 (25%)

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