DRSC/TRiP Functional Genomics Resources

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Protein Alignment PROKR2 and Prokr2

DIOPT Version :10

Sequence 1:NP_658986.1 Gene:PROKR2 / 128674 HGNCID:15836 Length:384 Species:Homo sapiens
Sequence 2:NP_620434.2 Gene:Prokr2 / 192649 RGDID:708445 Length:422 Species:Rattus norvegicus


Alignment Length:384 Identity:346/384 - (90%)
Similarity:368/384 - (95%) Gaps:0/384 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MAAQNGNTSFTPNFNPPQDHASSLSFNFSYGDYDLPMDEDEDMTKTRTFFAAKIVIGIALAGIML 65
            |..|||||||.|:.||||||.|.|..|:||||||:|:|:|||:|||:||||||||||:|||||||
  Rat    39 MGDQNGNTSFAPDLNPPQDHVSLLPLNYSYGDYDIPLDDDEDVTKTQTFFAAKIVIGVALAGIML 103

Human    66 VCGIGNFVFIAALTRYKKLRNLTNLLIANLAISDFLVAIICCPFEMDYYVVRQLSWEHGHVLCAS 130
            |||:|||||||||.|||||||||||||||||||||||||:|||||||||||||||||||||||||
  Rat   104 VCGVGNFVFIAALARYKKLRNLTNLLIANLAISDFLVAIVCCPFEMDYYVVRQLSWEHGHVLCAS 168

Human   131 VNYLRTVSLYVSTNALLAIAIDRYLAIVHPLKPRMNYQTASFLIALVWMVSILIAIPSAYFATET 195
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||
  Rat   169 VNYLRTVSLYVSTNALLAIAIDRYLAIVHPLKPRMNYQTASFLIALVWMVSILIAIPSAYFTTET 233

Human   196 VLFIVKSQEKIFCGQIWPVDQQLYYKSYFLFIFGVEFVGPVVTMTLCYARISRELWFKAVPGFQT 260
            :|.|||:|||:||||||||||||||||||||:||:|||||||||||||||||:||||||||||||
  Rat   234 ILVIVKNQEKLFCGQIWPVDQQLYYKSYFLFVFGLEFVGPVVTMTLCYARISQELWFKAVPGFQT 298

Human   261 EQIRKRLRCRRKTVLVLMCILTAYVLCWAPFYGFTIVRDFFPTVFVKEKHYLTAFYVVECIAMSN 325
            |||||||||||||||:||.||||||||||||||||||||||||:.||||||||||||||||||||
  Rat   299 EQIRKRLRCRRKTVLLLMGILTAYVLCWAPFYGFTIVRDFFPTLVVKEKHYLTAFYVVECIAMSN 363

Human   326 SMINTVCFVTVKNNTMKYFKKMMLLHWRPSQRGSKSSADLDLRTNGVPTTEEVDCIRLK 384
            |||||:||||||||||||||||:|||||||..||||||||||:|:|||.||||||||||
  Rat   364 SMINTICFVTVKNNTMKYFKKMLLLHWRPSHYGSKSSADLDLKTSGVPATEEVDCIRLK 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PROKR2NP_658986.1 7tmA_prokineticin-R 54..344 CDD:320332 272/289 (94%)
TM helix 1 55..81 CDD:320332 22/25 (88%)
TM helix 2 88..113 CDD:320332 23/24 (96%)
TM helix 3 128..158 CDD:320332 29/29 (100%)
TM helix 4 169..190 CDD:320332 20/20 (100%)
TM helix 5 220..249 CDD:320332 26/28 (93%)
TM helix 6 268..298 CDD:320332 27/29 (93%)
TM helix 7 312..337 CDD:320332 23/24 (96%)
Prokr2NP_620434.2 7tmA_prokineticin-R 92..382 CDD:320332 272/289 (94%)
TM helix 1 93..119 CDD:320332 22/25 (88%)
TM helix 2 126..151 CDD:320332 23/24 (96%)
TM helix 3 166..196 CDD:320332 29/29 (100%)
TM helix 4 207..228 CDD:320332 20/20 (100%)
TM helix 5 258..287 CDD:320332 26/28 (93%)
TM helix 6 306..336 CDD:320332 27/29 (93%)
TM helix 7 350..375 CDD:320332 23/24 (96%)

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