DRSC/TRiP Functional Genomics Resources

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Protein Alignment PROKR2 and Prokr2

DIOPT Version :9

Sequence 1:NP_658986.1 Gene:PROKR2 / 128674 HGNCID:15836 Length:384 Species:Homo sapiens
Sequence 2:NP_620434.2 Gene:Prokr2 / 192649 RGDID:708445 Length:422 Species:Rattus norvegicus


Alignment Length:384 Identity:346/384 - (90%)
Similarity:368/384 - (95%) Gaps:0/384 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MAAQNGNTSFTPNFNPPQDHASSLSFNFSYGDYDLPMDEDEDMTKTRTFFAAKIVIGIALAGIML 65
            |..|||||||.|:.||||||.|.|..|:||||||:|:|:|||:|||:||||||||||:|||||||
  Rat    39 MGDQNGNTSFAPDLNPPQDHVSLLPLNYSYGDYDIPLDDDEDVTKTQTFFAAKIVIGVALAGIML 103

Human    66 VCGIGNFVFIAALTRYKKLRNLTNLLIANLAISDFLVAIICCPFEMDYYVVRQLSWEHGHVLCAS 130
            |||:|||||||||.|||||||||||||||||||||||||:|||||||||||||||||||||||||
  Rat   104 VCGVGNFVFIAALARYKKLRNLTNLLIANLAISDFLVAIVCCPFEMDYYVVRQLSWEHGHVLCAS 168

Human   131 VNYLRTVSLYVSTNALLAIAIDRYLAIVHPLKPRMNYQTASFLIALVWMVSILIAIPSAYFATET 195
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||
  Rat   169 VNYLRTVSLYVSTNALLAIAIDRYLAIVHPLKPRMNYQTASFLIALVWMVSILIAIPSAYFTTET 233

Human   196 VLFIVKSQEKIFCGQIWPVDQQLYYKSYFLFIFGVEFVGPVVTMTLCYARISRELWFKAVPGFQT 260
            :|.|||:|||:||||||||||||||||||||:||:|||||||||||||||||:||||||||||||
  Rat   234 ILVIVKNQEKLFCGQIWPVDQQLYYKSYFLFVFGLEFVGPVVTMTLCYARISQELWFKAVPGFQT 298

Human   261 EQIRKRLRCRRKTVLVLMCILTAYVLCWAPFYGFTIVRDFFPTVFVKEKHYLTAFYVVECIAMSN 325
            |||||||||||||||:||.||||||||||||||||||||||||:.||||||||||||||||||||
  Rat   299 EQIRKRLRCRRKTVLLLMGILTAYVLCWAPFYGFTIVRDFFPTLVVKEKHYLTAFYVVECIAMSN 363

Human   326 SMINTVCFVTVKNNTMKYFKKMMLLHWRPSQRGSKSSADLDLRTNGVPTTEEVDCIRLK 384
            |||||:||||||||||||||||:|||||||..||||||||||:|:|||.||||||||||
  Rat   364 SMINTICFVTVKNNTMKYFKKMLLLHWRPSHYGSKSSADLDLKTSGVPATEEVDCIRLK 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PROKR2NP_658986.1 7tm_4 66..>220 CDD:304433 145/153 (95%)
7tm_1 70..329 CDD:278431 244/258 (95%)
Prokr2NP_620434.2 7tmA_prokineticin-R 92..382 CDD:320332 272/289 (94%)
TM helix 1 94..118 CDD:320332 21/23 (91%)
TM helix 2 127..149 CDD:320332 20/21 (95%)
TM helix 3 167..189 CDD:320332 21/21 (100%)
TM helix 4 210..226 CDD:320332 15/15 (100%)
TM helix 5 259..282 CDD:320332 20/22 (91%)
TM helix 6 312..334 CDD:320332 19/21 (90%)
TM helix 7 350..375 CDD:320332 23/24 (96%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83693220
Domainoid 1 1.000 505 1.000 Domainoid score I7106
eggNOG 00.000 Not matched by this tool.
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H16368
Inparanoid 1 1.050 713 1.000 Inparanoid score I8649
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG44227
OrthoDB 1 1.010 - - D109461at9347
OrthoFinder 1 1.000 - - FOG0007403
OrthoInspector 1 1.000 - - oto138930
orthoMCL 1 0.900 - - OOG6_108666
Panther 1 1.100 - - LDO PTHR24241
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4690
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1616.410

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