Sequence 1: | NP_034062.3 | Gene: | Col4a2 / 12827 | MGIID: | 88455 | Length: | 1707 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_723044.1 | Gene: | Col4a1 / 33727 | FlyBaseID: | FBgn0000299 | Length: | 1779 | Species: | Drosophila melanogaster |
Alignment Length: | 1885 | Identity: | 798/1885 - (42%) |
---|---|---|---|
Similarity: | 960/1885 - (50%) | Gaps: | 381/1885 - (20%) |
- Green bases have known domain annotations that are detailed below.
Mouse 34 GVKKLDVPCGGRDCS---GGC--QCYPEKGARGQPGAVGPQGYNGPPGLQGFPGLQGRKGDKGER 93
Mouse 94 GVPGPTGPKGDVGARGVSGFPGADGIPGHPGQGGPRGRPGYDGCNGTRGDAGPQGPSGSGGFPGL 158
Mouse 159 PGPQ------GPKGQKGEPYALSKEDRDKYRGEPGEP------GLVGYQGPPGRPGPIGQMGPMG 211
Mouse 212 APG-------------------RPGPPGPPGPKGQP-------------GNRGLGFYGQKGEKGD 244
Mouse 245 I---GQPGPNGIPSDITLVGPTTSTIHPDLYKGEK------GDEGEQ---GIPGVISKGEEGIMG 297
Mouse 298 FPGIRGFPGLDGEKGVVGQKGSRGLDGFQGPSGPRGPKGERGEQGPPGPS-----VYSPHPSLAK 357
Mouse 358 GARGDPGFQGAHGEPGSRGEPGEPGTAGPPGPSVGDEDSMRGLPGEMGPKGFSGEPGSPARYLGP 422
Mouse 423 PGADGRPGPQGVPGPAGPPGPDGFLFGLKGSEGRVGYPGPSGFPGTRGQKGWKGEA---GDCQCG 484
Mouse 485 Q-----VIG--------GLPGLPGPKGFPGVNGEL---------GKKGDQGDPGLHGIPGFPGFK 527
Mouse 528 GAPGVAGAPGPK---GIKGDSRTITTKGERGQPGIPGVHG---------------MKGDDGVPGR 574
Mouse 575 ---------DGLDGFPGLPGPPGD-------GIKGPPGDAGLPGVPGTKGFPGDIGPPGQGLP-- 621
Mouse 622 -------------GPKGERGFPGDAGL-------------PGPPGFPGPPGPPGTPGQRDCDTGV 660
Mouse 661 KRPIGGGQQVVVQPGCIEGPTGSPGQPGPPGPTGAKGVRGMPGFPGASGEQGLKGFPGDPGREGF 725
Mouse 726 PGPPGFMGPRGSKGTTGLPGPDGPPGPIGLPGPAGPPGDRGIPGEVLGAQPGTRGDAGLPGQPGL 790
Mouse 791 KGLPGETGAPGFRGSQGMPGM---PGLKGQPGFPGPSGQPGQSGPPGQHGFPGTPGREGPLGQPG 852
Mouse 853 SPGLGGLP---GDRGEPGD------------PGVPGPVGMKGLSGDRGDAGMSGERGHPGSPGFK 902
Mouse 903 GMAGMPGIPGQKGDR---GSPGMDGFQGMLGLKGRQGFPGTKGEAGFFGVPGLKGLPGEPGVKGN 964
Mouse 965 RGDRGPPGPPPLILPGMKDI-----------KGEKGDEGPMGLKGYLGLKGIQGMPGVPGVSGFP 1018
Mouse 1019 GLPGRPGFIKGVKGDIGVPGTPGLPGFPGVSGPPGITGFPGFTGSRGEKGTPGVAGVFGETGPTG 1083
Mouse 1084 DFGDIGDTVDLPGSPGLKGERGITGIPGL----------------KGFFGEKGAAGDIGFPGITG 1132
Mouse 1133 MAGAQGSPGLKGQTGFPGLTGLQGPQGEPGRIGIPGDKGDFGWPGV-----PGLPGFPGIRGISG 1192
Mouse 1193 LHGLPGTKGFPGSPGVDAHGDPGFPGPTGDRGDRGEANTLPGPVGVPGQKGERGTPGERGPAGSP 1257
Mouse 1258 GLQGFPGISPPSNISGSPGDVGAPGIFGLQGYQGPPGPPGPNALPGIKGDEGSSGAAGFPGQKGW 1322
Mouse 1323 VGDPGPQGQPGVLGLPGEKGPKGEQGFMGNTGPSGAVGDR---GPKGPKGDQGFPGAPGSMGSPG 1384
Mouse 1385 I---PGIPQKIAVQPGTLGPQGRRGLPGALGEIGPQGPPGDPGFRGAPGKAGPQGRGGVSAVPGF 1446
Mouse 1447 RGDQGPMGHQGPVGQEGEPGRPGSPGLPGMPGRSVSIGYLLVKHSQTDQEPMCPVGMNKLWSGYS 1511
Mouse 1512 LLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDVCYYASRNDKSYWLSTTAPLPMMPVAEE 1576
Mouse 1577 EIKPYISRCSVCEAPAVAIAVHSQDTSIPHCPAGWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSC 1641
Mouse 1642 LEDFRATPFIECNGGRGTCHYFANKYSFWLTTIPEQNFQSTPSADTLKAGLIRTHISRCQVCMKN 1706
Mouse 1707 1706 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Col4a2 | NP_034062.3 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 60..253 | 100/239 (42%) | |
Collagen | 67..121 | CDD:189968 | 26/53 (49%) | ||
Triple-helical region | 184..1479 | 592/1495 (40%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 266..476 | 91/223 (41%) | |||
Collagen | 312..387 | CDD:189968 | 35/79 (44%) | ||
Collagen | 489..543 | CDD:189968 | 29/65 (45%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 524..900 | 170/455 (37%) | |||
Collagen | 783..842 | CDD:189968 | 27/61 (44%) | ||
Collagen | 864..921 | CDD:189968 | 27/71 (38%) | ||
Collagen | 900..959 | CDD:189968 | 29/61 (48%) | ||
Collagen | 1007..1070 | CDD:189968 | 28/62 (45%) | ||
Collagen | 1102..1161 | CDD:189968 | 31/74 (42%) | ||
Collagen | 1147..1206 | CDD:189968 | 26/63 (41%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1195..1476 | 120/286 (42%) | |||
Collagen | 1324..1383 | CDD:189968 | 32/61 (52%) | ||
C4 | 1485..1589 | CDD:279721 | 59/103 (57%) | ||
C4 | 1594..1704 | CDD:279721 | 66/109 (61%) | ||
Col4a1 | NP_723044.1 | Collagen | 104..161 | CDD:189968 | 31/62 (50%) |
Collagen | 322..380 | CDD:189968 | 26/69 (38%) | ||
Collagen | 413..465 | CDD:189968 | 23/62 (37%) | ||
Collagen | 499..561 | CDD:189968 | 22/61 (36%) | ||
Collagen | 574..632 | CDD:189968 | 26/57 (46%) | ||
Collagen | 657..714 | CDD:189968 | 20/56 (36%) | ||
Collagen | 765..824 | CDD:189968 | 30/82 (37%) | ||
Collagen | 854..911 | CDD:189968 | 27/64 (42%) | ||
Collagen | 884..943 | CDD:189968 | 27/58 (47%) | ||
Collagen | 923..982 | CDD:189968 | 27/58 (47%) | ||
Collagen | 1028..1085 | CDD:189968 | 30/56 (54%) | ||
Collagen | 1229..1287 | CDD:189968 | 23/63 (37%) | ||
Collagen | 1318..1376 | CDD:189968 | 33/93 (35%) | ||
Collagen | 1399..1458 | CDD:189968 | 30/58 (52%) | ||
Collagen | 1477..1534 | CDD:189968 | 27/62 (44%) | ||
C4 | 1555..1662 | CDD:128421 | 62/106 (58%) | ||
C4 | 1663..1777 | CDD:128421 | 69/113 (61%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 146 | 1.000 | Domainoid score | I4520 |
eggNOG | 1 | 0.900 | - | - | E33208_3BAFZ | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 1 | 1.000 | - | - | H1390 | |
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D41315at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000443 | |
OrthoInspector | 1 | 1.000 | - | - | mtm8822 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100768 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2460 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
9 | 8.750 |