DRSC/TRiP Functional Genomics Resources

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Protein Alignment AgaP_AGAP002028 and HRT1

DIOPT Version :9

Sequence 1:XP_321026.4 Gene:AgaP_AGAP002028 / 1281089 VectorBaseID:AGAP002028 Length:615 Species:Anopheles gambiae
Sequence 2:NP_014508.1 Gene:HRT1 / 853986 SGDID:S000005493 Length:121 Species:Saccharomyces cerevisiae


Alignment Length:58 Identity:19/58 - (32%)
Similarity:25/58 - (43%) Gaps:16/58 - (27%)


- Green bases have known domain annotations that are detailed below.


Mosquito   256 DTCAICLEDFVE--------------NERLRVL-PCRHAYHAICIDPWLTKNRRVCPI 298
            |.||||....:|              ||.:... .|.||:|..||:.|: |.|..||:
Yeast    53 DNCAICRNHIMEPCIECQPKAMTDTDNECVAAWGVCNHAFHLHCINKWI-KTRDACPL 109

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AgaP_AGAP002028XP_321026.4 PA_C_RZF_like 51..197 CDD:239038
zf-RING_2 256..300 CDD:290367 19/58 (33%)
HRT1NP_014508.1 APC11 33..121 CDD:227521 19/58 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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